Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gm13922-201ENSMUST00000119505 156 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Gm6025-201ENSMUST00000121517 201 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Gm24598-201ENSMUST00000122510 74 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Gm23324-201ENSMUST00000157421 131 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Gm26403-201ENSMUST00000158500 105 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Gm16162-201ENSMUST00000162296 297 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Mir6386-201ENSMUST00000183558 104 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Pcdha4O88689 Gm43626-201ENSMUST00000198575 162 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.61□□□□□ -1.99
Pcdha4O88689 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Pcdha4O88689 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
Pcdha4O88689 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.6□□□□□ -1.99
Pcdha4O88689 Gm13913-201ENSMUST00000121126 260 ntBASIC2.6□□□□□ -1.99
Pcdha4O88689 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.6□□□□□ -1.99
Pcdha4O88689 Gm25711-201ENSMUST00000158633 128 ntBASIC2.6□□□□□ -1.99
Pcdha4O88689 Gm24277-201ENSMUST00000158661 104 ntBASIC2.6□□□□□ -1.99
Pcdha4O88689 Gm23922-201ENSMUST00000178792 79 ntBASIC2.6□□□□□ -1.99
Pcdha4O88689 Gm26435-201ENSMUST00000179026 107 ntBASIC2.6□□□□□ -1.99
Pcdha4O88689 Gm24657-201ENSMUST00000180085 79 ntBASIC2.6□□□□□ -1.99
Pcdha4O88689 Gm22996-201ENSMUST00000180236 79 ntBASIC2.6□□□□□ -1.99
Pcdha4O88689 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Pcdha4O88689 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Pcdha4O88689 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Pcdha4O88689 Mir1298-201ENSMUST00000116681 98 ntBASIC2.59□□□□□ -1.99
Pcdha4O88689 Gm15214-201ENSMUST00000122155 470 ntBASIC2.59□□□□□ -1.99
Pcdha4O88689 Gm24937-201ENSMUST00000122597 134 ntBASIC2.59□□□□□ -1.99
Pcdha4O88689 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.59□□□□□ -1.99
Pcdha4O88689 Gm23194-201ENSMUST00000158813 105 ntBASIC2.59□□□□□ -1.99
Pcdha4O88689 Gm16561-201ENSMUST00000163001 192 ntBASIC2.59□□□□□ -1.99
Pcdha4O88689 Mir6917-201ENSMUST00000184111 61 ntBASIC2.59□□□□□ -1.99
Pcdha4O88689 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Pcdha4O88689 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Pcdha4O88689 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Pcdha4O88689 Gm25879-201ENSMUST00000104330 107 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm6952-201ENSMUST00000118629 159 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm23655-201ENSMUST00000122627 105 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm22221-201ENSMUST00000157362 103 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm22139-201ENSMUST00000158747 105 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Mir3092-201ENSMUST00000174954 96 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm27991-201ENSMUST00000184804 137 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm29308-201ENSMUST00000188863 315 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm28537-201ENSMUST00000189026 315 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm29631-201ENSMUST00000191065 315 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.58□□□□□ -2
Pcdha4O88689 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Gm23722-201ENSMUST00000083002 130 ntBASIC2.58□□□□□ -2
Pcdha4O88689 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Pcdha4O88689 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Pcdha4O88689 Mir374b-201ENSMUST00000102314 95 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Gm23015-201ENSMUST00000104145 128 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Gm24054-201ENSMUST00000158619 105 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.57□□□□□ -2
Pcdha4O88689 Mir6353-201ENSMUST00000183596 113 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Gm44338-201ENSMUST00000198614 110 ntBASIC2.57□□□□□ -2
Pcdha4O88689 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Gm25814-201ENSMUST00000082754 107 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Gm24615-201ENSMUST00000083268 113 ntBASIC2.57□□□□□ -2
Pcdha4O88689 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Pcdha4O88689 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Pcdha4O88689 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Pcdha4O88689 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm22935-201ENSMUST00000103960 104 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm25529-201ENSMUST00000104850 92 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm26473-201ENSMUST00000116763 127 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm22535-201ENSMUST00000158174 119 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm25464-201ENSMUST00000175481 107 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm42988-201ENSMUST00000198116 225 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Mir7215-201ENSMUST00000200383 51 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm15235-201ENSMUST00000200572 194 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm18502-201ENSMUST00000218679 199 ntBASIC2.56□□□□□ -2
Pcdha4O88689 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Gm26175-201ENSMUST00000083794 131 ntBASIC2.56□□□□□ -2
Pcdha4O88689 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Pcdha4O88689 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.55□□□□□ -2
Pcdha4O88689 Gm26015-201ENSMUST00000104402 125 ntBASIC2.55□□□□□ -2
Pcdha4O88689 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.55□□□□□ -2
Pcdha4O88689 Gm25945-201ENSMUST00000122484 135 ntBASIC2.55□□□□□ -2
Pcdha4O88689 Gm24595-201ENSMUST00000122501 110 ntBASIC2.55□□□□□ -2
Pcdha4O88689 Gm22967-201ENSMUST00000157956 239 ntBASIC2.55□□□□□ -2
Pcdha4O88689 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.55□□□□□ -2
Pcdha4O88689 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.55□□□□□ -2
Pcdha4O88689 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.55□□□□□ -2
Pcdha4O88689 Mir488-201ENSMUST00000093595 109 ntBASIC2.55□□□□□ -2
Pcdha4O88689 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.55□□□□□ -2
Pcdha4O88689 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.54□□□□□ -2
Pcdha4O88689 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.54□□□□□ -2
Pcdha4O88689 Gm23651-201ENSMUST00000116755 120 ntBASIC2.54□□□□□ -2
Pcdha4O88689 Gm24390-201ENSMUST00000179578 62 ntBASIC2.54□□□□□ -2
Pcdha4O88689 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.54□□□□□ -2
Pcdha4O88689 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.54□□□□□ -2
Pcdha4O88689 Snord7-201ENSMUST00000083781 97 ntBASIC2.54□□□□□ -2
Pcdha4O88689 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Pcdha4O88689 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.54□□□□□ -2
Pcdha4O88689 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.54□□□□□ -2
Pcdha4O88689 Gm13560-201ENSMUST00000121865 329 ntBASIC2.53□□□□□ -2
Pcdha4O88689 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms