Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Gm37557-201ENSMUST00000191640 139 ntBASIC1.58□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm44491-201ENSMUST00000196794 96 ntBASIC1.58□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.58□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir410-201ENSMUST00000083563 81 ntBASIC1.58□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.58□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Rny1-201ENSMUST00000083767 112 ntBASIC1.58□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm26022-201ENSMUST00000158663 108 ntBASIC1.57□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm16162-201ENSMUST00000162296 297 ntBASIC1.57□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm29022-201ENSMUST00000190702 225 ntBASIC1.57□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm43563-201ENSMUST00000196761 198 ntBASIC1.57□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir7021-201ENSMUST00000197026 63 ntBASIC1.57□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.57□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm25204-201ENSMUST00000082843 106 ntBASIC1.57□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Snord118-201ENSMUST00000082965 135 ntBASIC1.57□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm23705-201ENSMUST00000104370 130 ntBASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm24478-201ENSMUST00000157439 158 ntBASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm23219-201ENSMUST00000158123 87 ntBASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm23182-201ENSMUST00000158688 135 ntBASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm23047-201ENSMUST00000177661 94 ntBASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.56□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm22554-201ENSMUST00000157798 147 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm23854-201ENSMUST00000158378 108 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm24006-201ENSMUST00000158462 132 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm17113-201ENSMUST00000170118 171 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm22248-201ENSMUST00000082482 150 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm24536-201ENSMUST00000083144 107 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir429-201ENSMUST00000083493 83 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.55□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm22217-201ENSMUST00000157556 313 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir1951-201ENSMUST00000157981 89 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm27579-201ENSMUST00000158113 63 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm26468-201ENSMUST00000158644 106 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm25994-201ENSMUST00000175392 101 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm23002-201ENSMUST00000179221 107 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm27979-201ENSMUST00000185126 56 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm37778-201ENSMUST00000191732 190 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm25813-201ENSMUST00000082748 191 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm24044-201ENSMUST00000083107 156 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir151-201ENSMUST00000083678 68 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm25513-201ENSMUST00000083861 162 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Snord70-201ENSMUST00000104157 87 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm12686-201ENSMUST00000120546 397 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm14491-201ENSMUST00000121919 199 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm15692-201ENSMUST00000152173 352 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm20477-201ENSMUST00000174028 280 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir466e-201ENSMUST00000198862 84 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Snord43-201ENSMUST00000199549 108 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.53□□□□□ -2.16
Ighv3-4A0A0A6YXF1 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm23766-201ENSMUST00000103894 80 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm25832-201ENSMUST00000104140 130 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Mir1949-201ENSMUST00000157434 141 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm22768-201ENSMUST00000158366 153 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm26426-201ENSMUST00000177866 123 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm26060-201ENSMUST00000180094 123 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm44563-201ENSMUST00000207958 178 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm44938-201ENSMUST00000208614 427 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm5010-201ENSMUST00000213131 260 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Snora19-201ENSMUST00000082962 132 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm22421-201ENSMUST00000083058 107 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm23658-201ENSMUST00000083233 132 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Mir155-201ENSMUST00000083463 65 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Mir301-201ENSMUST00000083655 86 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Mir107-201ENSMUST00000083660 87 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Gm22761-201ENSMUST00000102278 96 ntBASIC1.51□□□□□ -2.17
Ighv3-4A0A0A6YXF1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 169.4 ms