Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm28831-201ENSMUST00000187739 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28752-201ENSMUST00000188340 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28569-201ENSMUST00000188748 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28120-201ENSMUST00000188812 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28369-201ENSMUST00000188993 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm29037-201ENSMUST00000189092 313 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28861-201ENSMUST00000189681 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm29180-201ENSMUST00000190003 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm29575-201ENSMUST00000190597 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm29469-201ENSMUST00000191448 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Snord43-201ENSMUST00000199549 108 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm5899-201ENSMUST00000071770 270 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm10298-201ENSMUST00000074801 265 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm22997-201ENSMUST00000082845 107 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Mir22-201ENSMUST00000083595 95 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm23040-201ENSMUST00000083869 163 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm15010-201ENSMUST00000117153 407 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 U6.1-201ENSMUST00000157443 101 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm5329-201ENSMUST00000186898 463 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm28921-201ENSMUST00000190219 378 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm44055-201ENSMUST00000204376 247 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm44960-201ENSMUST00000207403 141 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm45386-201ENSMUST00000210194 218 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Gm23517-201ENSMUST00000082830 192 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Mir496a-201ENSMUST00000093627 79 ntBASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Col4a4Q9QZR9 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm25497-201ENSMUST00000104425 132 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Mdga2-203ENSMUST00000113942 423 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm14774-201ENSMUST00000117857 536 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm23829-201ENSMUST00000157392 270 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm22113-201ENSMUST00000158343 104 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm28257-201ENSMUST00000185244 463 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm37713-201ENSMUST00000191746 198 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm33866-201ENSMUST00000196911 289 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm18546-201ENSMUST00000197245 676 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm43583-201ENSMUST00000199235 303 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm22620-201ENSMUST00000082700 133 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm24165-201ENSMUST00000082718 128 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm26327-201ENSMUST00000093724 111 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.17□□□□□ -2.22
Col4a4Q9QZR9 Gm25454-201ENSMUST00000157947 315 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm23542-201ENSMUST00000158208 96 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm27511-201ENSMUST00000183502 127 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Mir6399-201ENSMUST00000184050 84 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm42739-201ENSMUST00000200687 226 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm45403-201ENSMUST00000209453 276 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm45815-201ENSMUST00000220241 146 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm23625-201ENSMUST00000082457 100 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm22685-201ENSMUST00000082848 106 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Mir29c-201ENSMUST00000083614 88 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Mir151-201ENSMUST00000083678 68 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm23042-201ENSMUST00000083866 101 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm24282-201ENSMUST00000104232 66 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm23202-201ENSMUST00000104376 129 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Mir872-201ENSMUST00000104728 81 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm11794-201ENSMUST00000119446 237 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm11786-201ENSMUST00000120799 155 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm15365-201ENSMUST00000122392 300 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm14298-201ENSMUST00000139032 237 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm16356-201ENSMUST00000143300 169 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm22675-201ENSMUST00000158430 104 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm23181-201ENSMUST00000158685 110 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm16162-201ENSMUST00000162296 297 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm24084-201ENSMUST00000175173 137 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Mir6355-201ENSMUST00000183687 106 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Mir7661-201ENSMUST00000197023 61 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm44429-201ENSMUST00000203542 186 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Gm24356-201ENSMUST00000082859 106 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Mir32-201ENSMUST00000083610 70 ntBASIC1.16□□□□□ -2.22
Col4a4Q9QZR9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Col4a4Q9QZR9 Gm25943-201ENSMUST00000103791 90 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 131.6 ms