Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.04□□□□□ -2.08
Rnf6Q9DBU5 Gm44024-201ENSMUST00000203008 476 ntBASIC2.04□□□□□ -2.08
Rnf6Q9DBU5 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.04□□□□□ -2.08
Rnf6Q9DBU5 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.04□□□□□ -2.08
Rnf6Q9DBU5 Gm25402-201ENSMUST00000082966 131 ntBASIC2.04□□□□□ -2.08
Rnf6Q9DBU5 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Gm23466-201ENSMUST00000157133 106 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Gm22337-201ENSMUST00000157721 132 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Gm17052-201ENSMUST00000165496 289 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Gm25020-201ENSMUST00000178071 107 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Mir6399-201ENSMUST00000184050 84 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Gm43512-201ENSMUST00000198495 176 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Mir93-201ENSMUST00000083593 88 ntBASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Rnf6Q9DBU5 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.02□□□□□ -2.09
Rnf6Q9DBU5 Gm25377-201ENSMUST00000104334 129 ntBASIC2.02□□□□□ -2.09
Rnf6Q9DBU5 Gm16032-201ENSMUST00000118534 168 ntBASIC2.02□□□□□ -2.09
Rnf6Q9DBU5 Gm5396-201ENSMUST00000121222 532 ntBASIC2.02□□□□□ -2.09
Rnf6Q9DBU5 Gm22883-201ENSMUST00000157376 106 ntBASIC2.02□□□□□ -2.09
Rnf6Q9DBU5 Gm26265-202ENSMUST00000196326 133 ntBASIC2.02□□□□□ -2.09
Rnf6Q9DBU5 Gm6105-201ENSMUST00000200580 624 ntBASIC2.02□□□□□ -2.09
Rnf6Q9DBU5 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm6444-201ENSMUST00000119611 458 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm12304-201ENSMUST00000120312 385 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm25428-201ENSMUST00000157608 114 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm25368-201ENSMUST00000158847 131 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm17161-201ENSMUST00000169187 524 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm27585-201ENSMUST00000183717 199 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm29005-201ENSMUST00000186773 320 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm43563-201ENSMUST00000196761 198 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm20144-201ENSMUST00000203031 165 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm44182-201ENSMUST00000204052 115 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm44563-201ENSMUST00000207958 178 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Mir30d-201ENSMUST00000083503 82 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Mir471-201ENSMUST00000093596 67 ntBASIC2.01□□□□□ -2.09
Rnf6Q9DBU5 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm43484-201ENSMUST00000198333 5966 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm23013-201ENSMUST00000104146 106 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm14215-201ENSMUST00000120578 221 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 n-R5s159-201ENSMUST00000122681 120 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 n-R5s150-201ENSMUST00000122705 108 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm25115-201ENSMUST00000157187 140 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm23589-201ENSMUST00000157660 105 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm26412-201ENSMUST00000157666 55 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm22097-201ENSMUST00000157929 278 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm25051-201ENSMUST00000158602 249 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm27928-201ENSMUST00000183747 256 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm27991-201ENSMUST00000184804 137 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm27544-201ENSMUST00000185069 155 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm19901-201ENSMUST00000192191 495 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm18991-201ENSMUST00000209225 746 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2□□□□□ -2.09
Rnf6Q9DBU5 AC154328.1-201ENSMUST00000225875 307 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm23377-201ENSMUST00000082943 126 ntBASIC2□□□□□ -2.09
Rnf6Q9DBU5 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2□□□□□ -2.09
Rnf6Q9DBU5 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Rnf6Q9DBU5 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm25538-201ENSMUST00000101943 107 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm22494-201ENSMUST00000104495 128 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm11204-201ENSMUST00000122438 147 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm26026-201ENSMUST00000122726 123 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Mir1967-201ENSMUST00000157789 82 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Mir6379-201ENSMUST00000183392 115 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Mir7678-201ENSMUST00000185076 71 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm29167-201ENSMUST00000190024 377 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm43993-201ENSMUST00000203972 247 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm7214-201ENSMUST00000222428 272 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm24966-201ENSMUST00000082443 79 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Mir146-201ENSMUST00000083667 65 ntBASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Rnf6Q9DBU5 Gm23492-201ENSMUST00000116837 115 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm23536-201ENSMUST00000157541 134 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm23535-201ENSMUST00000157542 106 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm25914-201ENSMUST00000157618 153 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm27396-201ENSMUST00000157708 58 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm24770-201ENSMUST00000158505 92 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm24388-201ENSMUST00000177872 107 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm17067-202ENSMUST00000180131 123 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm11351-202ENSMUST00000225724 478 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm24762-201ENSMUST00000083689 104 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.98□□□□□ -2.09
Rnf6Q9DBU5 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms