Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Mir15a-201ENSMUST00000175266 84 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm16404-201ENSMUST00000177739 468 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm24308-201ENSMUST00000177773 114 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm7958-201ENSMUST00000178255 468 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm7950-201ENSMUST00000179633 468 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm23410-201ENSMUST00000179967 107 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm14598-201ENSMUST00000180109 468 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm22756-201ENSMUST00000180118 107 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm14625-201ENSMUST00000180231 468 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm43220-201ENSMUST00000199299 282 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm44921-201ENSMUST00000205290 301 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm22505-201ENSMUST00000082956 108 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm22363-201ENSMUST00000083100 108 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm23814-201ENSMUST00000083230 102 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm25789-201ENSMUST00000083294 76 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm23095-201ENSMUST00000083446 107 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm24258-201ENSMUST00000083739 133 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm24523-201ENSMUST00000083965 132 ntBASIC0.48□□□□□ -2.33
Rpa3Q9CQ71 Gm23991-201ENSMUST00000117033 93 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm11248-201ENSMUST00000119568 201 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm15719-201ENSMUST00000120619 635 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm23435-201ENSMUST00000157183 156 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm22163-201ENSMUST00000158408 135 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm25486-201ENSMUST00000158726 63 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm17067-202ENSMUST00000180131 123 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm28992-201ENSMUST00000190534 139 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm36953-201ENSMUST00000195295 268 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm5034-201ENSMUST00000199115 634 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm20144-201ENSMUST00000203031 165 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Gm22704-201ENSMUST00000083027 137 ntBASIC0.47□□□□□ -2.33
Rpa3Q9CQ71 Mir1b-201ENSMUST00000117012 122 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Gm12433-201ENSMUST00000119659 255 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Gm22796-201ENSMUST00000157234 106 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Gm24962-201ENSMUST00000157917 109 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Gm24901-201ENSMUST00000158125 110 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Gm22166-201ENSMUST00000178419 121 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Gm23288-201ENSMUST00000179213 121 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Mir6394-201ENSMUST00000184738 99 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Gm44976-201ENSMUST00000205543 261 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.46□□□□□ -2.34
Rpa3Q9CQ71 Gm24241-201ENSMUST00000157787 145 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm24678-201ENSMUST00000158756 104 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm23008-201ENSMUST00000158946 80 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm24618-201ENSMUST00000177718 94 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm23953-201ENSMUST00000178214 94 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm26332-201ENSMUST00000179813 94 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm22863-201ENSMUST00000180265 94 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm28343-201ENSMUST00000185386 112 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm18296-201ENSMUST00000192475 783 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm44465-201ENSMUST00000199536 114 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm44960-201ENSMUST00000207403 141 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm25586-201ENSMUST00000082499 112 ntBASIC0.45□□□□□ -2.34
Rpa3Q9CQ71 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 Gm13577-201ENSMUST00000121365 205 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 Gm25163-201ENSMUST00000158905 104 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 Gm18588-201ENSMUST00000177308 492 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 Gm28435-201ENSMUST00000185496 108 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 Gm29229-201ENSMUST00000188874 323 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.44□□□□□ -2.34
Rpa3Q9CQ71 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm25378-201ENSMUST00000104333 129 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm14568-201ENSMUST00000119321 294 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm13059-201ENSMUST00000119881 398 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm14269-201ENSMUST00000120455 306 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm22522-201ENSMUST00000158271 151 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm28921-201ENSMUST00000190219 378 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm44458-201ENSMUST00000196594 143 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm24355-201ENSMUST00000082858 122 ntBASIC0.43□□□□□ -2.34
Rpa3Q9CQ71 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm12584-201ENSMUST00000117109 1105 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm27926-201ENSMUST00000157180 66 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm23672-201ENSMUST00000157471 107 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm26484-201ENSMUST00000158018 106 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm26285-201ENSMUST00000177923 107 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm24799-201ENSMUST00000178431 79 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm28408-201ENSMUST00000191557 463 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm23622-201ENSMUST00000082460 107 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm24356-201ENSMUST00000082859 106 ntBASIC0.42□□□□□ -2.34
Rpa3Q9CQ71 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 Gm16358-201ENSMUST00000146046 210 ntBASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 172.6 ms