Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm25749-201ENSMUST00000175485 111 ntBASIC2.4□□□□□ -2.03
Syne4Q8CII8 Snord50b-201ENSMUST00000178497 72 ntBASIC2.4□□□□□ -2.03
Syne4Q8CII8 Gm27443-201ENSMUST00000184660 98 ntBASIC2.4□□□□□ -2.03
Syne4Q8CII8 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.4□□□□□ -2.03
Syne4Q8CII8 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.4□□□□□ -2.03
Syne4Q8CII8 Gm22731-201ENSMUST00000158086 94 ntBASIC2.39□□□□□ -2.03
Syne4Q8CII8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.39□□□□□ -2.03
Syne4Q8CII8 Gm20630-201ENSMUST00000177387 551 ntBASIC2.39□□□□□ -2.03
Syne4Q8CII8 Mir3087-201ENSMUST00000199405 56 ntBASIC2.39□□□□□ -2.03
Syne4Q8CII8 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC2.39□□□□□ -2.03
Syne4Q8CII8 Gm45791-201ENSMUST00000212908 352 ntBASIC2.39□□□□□ -2.03
Syne4Q8CII8 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.39□□□□□ -2.03
Syne4Q8CII8 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Syne4Q8CII8 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.39□□□□□ -2.03
Syne4Q8CII8 Gm26345-201ENSMUST00000157534 120 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 Gm23033-201ENSMUST00000157996 134 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 Gm23258-201ENSMUST00000158319 106 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 Gm22433-201ENSMUST00000158550 142 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 Gm43626-201ENSMUST00000198575 162 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 Gm45456-201ENSMUST00000210841 243 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 Gm24661-201ENSMUST00000083205 104 ntBASIC2.38□□□□□ -2.03
Syne4Q8CII8 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Syne4Q8CII8 Gm23892-201ENSMUST00000158105 130 ntBASIC2.37□□□□□ -2.03
Syne4Q8CII8 Mir8116-201ENSMUST00000184134 97 ntBASIC2.37□□□□□ -2.03
Syne4Q8CII8 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.37□□□□□ -2.03
Syne4Q8CII8 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.37□□□□□ -2.03
Syne4Q8CII8 Gm45445-201ENSMUST00000209586 232 ntBASIC2.37□□□□□ -2.03
Syne4Q8CII8 Gm26922-201ENSMUST00000082687 72 ntBASIC2.37□□□□□ -2.03
Syne4Q8CII8 Gm23249-201ENSMUST00000083369 161 ntBASIC2.37□□□□□ -2.03
Syne4Q8CII8 Mir410-201ENSMUST00000083563 81 ntBASIC2.37□□□□□ -2.03
Syne4Q8CII8 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Syne4Q8CII8 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Syne4Q8CII8 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Syne4Q8CII8 Gm22935-201ENSMUST00000103960 104 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Gm24907-201ENSMUST00000116932 128 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Gm22556-201ENSMUST00000157803 100 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Gm25460-201ENSMUST00000157954 127 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Gm26157-201ENSMUST00000158974 126 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Gm2962-201ENSMUST00000159266 336 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Gm16326-201ENSMUST00000162843 414 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.36□□□□□ -2.03
Syne4Q8CII8 Gm42672-201ENSMUST00000197821 352 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Snord104-201ENSMUST00000083192 70 ntBASIC2.36□□□□□ -2.03
Syne4Q8CII8 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Syne4Q8CII8 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Syne4Q8CII8 Mir541-201ENSMUST00000102097 90 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm25943-201ENSMUST00000103791 90 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Mir466b-7-201ENSMUST00000103804 88 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Mir466b-5-201ENSMUST00000103900 88 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm16328-201ENSMUST00000126985 196 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm26280-201ENSMUST00000157096 101 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm24729-201ENSMUST00000158225 137 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm24510-201ENSMUST00000174965 94 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Mir466b-4-201ENSMUST00000178801 90 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm25285-201ENSMUST00000178951 90 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Mir466b-6-201ENSMUST00000180061 90 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Mir466c-2-201ENSMUST00000180211 90 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm27421-201ENSMUST00000184729 167 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Mir6901-201ENSMUST00000185062 62 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm43563-201ENSMUST00000196761 198 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Syne4Q8CII8 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.35□□□□□ -2.03
Syne4Q8CII8 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Syne4Q8CII8 Gm22145-201ENSMUST00000157396 148 ntBASIC2.34□□□□□ -2.03
Syne4Q8CII8 Gm25720-201ENSMUST00000157503 105 ntBASIC2.34□□□□□ -2.03
Syne4Q8CII8 Gm22338-201ENSMUST00000157715 129 ntBASIC2.34□□□□□ -2.03
Syne4Q8CII8 Gm24277-201ENSMUST00000158661 104 ntBASIC2.34□□□□□ -2.03
Syne4Q8CII8 Gm23090-201ENSMUST00000177331 78 ntBASIC2.34□□□□□ -2.03
Syne4Q8CII8 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.34□□□□□ -2.03
Syne4Q8CII8 Gm22248-201ENSMUST00000082482 150 ntBASIC2.34□□□□□ -2.03
Syne4Q8CII8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.34□□□□□ -2.04
Syne4Q8CII8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm14748-201ENSMUST00000119819 411 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm25491-201ENSMUST00000158733 308 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm17113-201ENSMUST00000170118 171 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm22510-201ENSMUST00000179304 79 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm26336-201ENSMUST00000179449 79 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm26390-201ENSMUST00000179628 79 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm24638-201ENSMUST00000179807 132 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm42960-201ENSMUST00000202160 241 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm44563-201ENSMUST00000207958 178 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm24313-201ENSMUST00000082561 133 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm25204-201ENSMUST00000082843 106 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm24042-201ENSMUST00000083114 103 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Mir423-201ENSMUST00000083584 109 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.33□□□□□ -2.04
Syne4Q8CII8 Gm23836-201ENSMUST00000104434 129 ntBASIC2.32□□□□□ -2.04
Syne4Q8CII8 Gm13913-201ENSMUST00000121126 260 ntBASIC2.32□□□□□ -2.04
Syne4Q8CII8 Gm14491-201ENSMUST00000121919 199 ntBASIC2.32□□□□□ -2.04
Syne4Q8CII8 Gm24594-201ENSMUST00000122502 99 ntBASIC2.32□□□□□ -2.04
Syne4Q8CII8 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 231.8 ms