Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Gm25091-201ENSMUST00000103997 71 ntBASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Gm14881-201ENSMUST00000120366 372 ntBASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Gm26150-201ENSMUST00000157426 151 ntBASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Gm22251-201ENSMUST00000083216 107 ntBASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Gm10212-201ENSMUST00000087884 324 ntBASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Gm22079-201ENSMUST00000157592 106 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Gm22163-201ENSMUST00000158408 135 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Gm23736-201ENSMUST00000082553 75 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Gm22950-201ENSMUST00000082776 107 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Gm23038-201ENSMUST00000083873 104 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 BC022960-201ENSMUST00000119987 1815 ntBASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Pcdhb7Q8CDY9 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Gm12025-201ENSMUST00000117768 144 ntBASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Gm15281-201ENSMUST00000125181 351 ntBASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Gm23671-201ENSMUST00000157472 103 ntBASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Gm22501-201ENSMUST00000158981 127 ntBASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Gm45245-201ENSMUST00000210082 376 ntBASIC3.34□□□□□ -1.87
Pcdhb7Q8CDY9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Mir547-201ENSMUST00000102051 78 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Gm25727-201ENSMUST00000104522 131 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Gm23530-201ENSMUST00000104564 137 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Gm25224-201ENSMUST00000158195 68 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Rnu7-201ENSMUST00000158458 62 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Gm28669-201ENSMUST00000188400 100 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.33□□□□□ -1.88
Pcdhb7Q8CDY9 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Pcdhb7Q8CDY9 Gm13076-201ENSMUST00000118041 204 ntBASIC3.32□□□□□ -1.88
Pcdhb7Q8CDY9 Gm25771-201ENSMUST00000158565 144 ntBASIC3.32□□□□□ -1.88
Pcdhb7Q8CDY9 Gm44399-201ENSMUST00000205043 226 ntBASIC3.32□□□□□ -1.88
Pcdhb7Q8CDY9 Gm24536-201ENSMUST00000083144 107 ntBASIC3.32□□□□□ -1.88
Pcdhb7Q8CDY9 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Pcdhb7Q8CDY9 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Pcdhb7Q8CDY9 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Gm22196-201ENSMUST00000116865 109 ntBASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Gm4479-201ENSMUST00000178807 171 ntBASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Gm27760-201ENSMUST00000185048 114 ntBASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Gm21007-201ENSMUST00000221024 326 ntBASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdhb7Q8CDY9 Gm22031-201ENSMUST00000116945 126 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm16355-201ENSMUST00000128606 231 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm22141-201ENSMUST00000157403 277 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Mir1934-201ENSMUST00000158127 83 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm25519-201ENSMUST00000158392 127 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm23817-201ENSMUST00000158449 104 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm22910-201ENSMUST00000178568 132 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm8034-201ENSMUST00000178853 132 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Snord35b-201ENSMUST00000082833 87 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdhb7Q8CDY9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Pcdhb7Q8CDY9 Gm22451-201ENSMUST00000122803 151 ntBASIC3.29□□□□□ -1.88
Pcdhb7Q8CDY9 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.29□□□□□ -1.88
Pcdhb7Q8CDY9 Gm43217-201ENSMUST00000199513 367 ntBASIC3.29□□□□□ -1.88
Pcdhb7Q8CDY9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdhb7Q8CDY9 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdhb7Q8CDY9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Pcdhb7Q8CDY9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdhb7Q8CDY9 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdhb7Q8CDY9 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.28□□□□□ -1.88
Pcdhb7Q8CDY9 Mir293-201ENSMUST00000104841 80 ntBASIC3.28□□□□□ -1.88
Pcdhb7Q8CDY9 Gm23654-201ENSMUST00000116758 126 ntBASIC3.28□□□□□ -1.88
Pcdhb7Q8CDY9 Gm22796-201ENSMUST00000157234 106 ntBASIC3.28□□□□□ -1.88
Pcdhb7Q8CDY9 Gm25769-201ENSMUST00000158569 127 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 166.9 ms