Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Ccdc60Q8C4J0 Gm25078-201ENSMUST00000082530 107 ntBASIC1.43□□□□□ -2.18
Ccdc60Q8C4J0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Ccdc60Q8C4J0 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Gm22836-201ENSMUST00000158441 61 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Gm24677-201ENSMUST00000158755 150 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Gm27419-201ENSMUST00000184576 109 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Gm28418-201ENSMUST00000186179 423 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Mir410-201ENSMUST00000083563 81 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Gm24252-201ENSMUST00000083700 132 ntBASIC1.42□□□□□ -2.18
Ccdc60Q8C4J0 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.41□□□□□ -2.18
Ccdc60Q8C4J0 Gm14937-201ENSMUST00000119709 208 ntBASIC1.41□□□□□ -2.18
Ccdc60Q8C4J0 Gm22215-201ENSMUST00000157558 96 ntBASIC1.41□□□□□ -2.18
Ccdc60Q8C4J0 Gm24818-201ENSMUST00000175093 161 ntBASIC1.41□□□□□ -2.18
Ccdc60Q8C4J0 Gm37404-201ENSMUST00000195726 359 ntBASIC1.41□□□□□ -2.18
Ccdc60Q8C4J0 Mir376a-201ENSMUST00000197584 68 ntBASIC1.41□□□□□ -2.18
Ccdc60Q8C4J0 Mir6962-201ENSMUST00000199512 63 ntBASIC1.41□□□□□ -2.18
Ccdc60Q8C4J0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
Ccdc60Q8C4J0 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Mir759-201ENSMUST00000103254 98 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm25318-201ENSMUST00000122554 314 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm24668-201ENSMUST00000158935 104 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm22114-201ENSMUST00000177756 107 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm26914-201ENSMUST00000182262 223 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Mir6381-201ENSMUST00000183426 87 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm27421-201ENSMUST00000184729 167 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Mir6419-201ENSMUST00000184784 113 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm28200-201ENSMUST00000187778 315 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm29378-201ENSMUST00000188723 315 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm28909-201ENSMUST00000189406 315 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm44419-201ENSMUST00000203338 229 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Gm5010-201ENSMUST00000213131 260 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Snora3-201ENSMUST00000083082 132 ntBASIC1.4□□□□□ -2.19
Ccdc60Q8C4J0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm25781-201ENSMUST00000122527 84 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm22027-201ENSMUST00000122737 127 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm23170-201ENSMUST00000157158 106 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm23759-201ENSMUST00000158351 268 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm25069-201ENSMUST00000175238 86 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm7958-201ENSMUST00000178255 468 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm7950-201ENSMUST00000179633 468 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm27517-201ENSMUST00000184347 236 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm44468-201ENSMUST00000199516 105 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm45116-201ENSMUST00000207392 275 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm22294-201ENSMUST00000083308 104 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Gm24163-201ENSMUST00000093660 132 ntBASIC1.39□□□□□ -2.19
Ccdc60Q8C4J0 Mir653-201ENSMUST00000102402 85 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm11606-201ENSMUST00000120706 617 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm24630-201ENSMUST00000122768 106 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm25371-201ENSMUST00000158162 101 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm22537-201ENSMUST00000158172 199 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm25450-201ENSMUST00000179144 107 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm23714-201ENSMUST00000179259 105 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm37693-201ENSMUST00000194562 234 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm23370-201ENSMUST00000199545 130 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm24966-201ENSMUST00000082443 79 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm26111-201ENSMUST00000083969 106 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.38□□□□□ -2.19
Ccdc60Q8C4J0 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 Gm25068-201ENSMUST00000103895 110 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 Gm22935-201ENSMUST00000103960 104 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 Gm23656-201ENSMUST00000122626 112 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 Gm24229-201ENSMUST00000158830 118 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 Gm26363-201ENSMUST00000158866 83 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 Gm42834-201ENSMUST00000196845 256 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.37□□□□□ -2.19
Ccdc60Q8C4J0 Gm26339-201ENSMUST00000102368 99 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Gm23390-201ENSMUST00000157393 106 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Gm25914-201ENSMUST00000157618 153 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Gm22551-201ENSMUST00000157795 103 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Gm23474-201ENSMUST00000158884 75 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Gm27540-201ENSMUST00000184950 187 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Mir22-201ENSMUST00000083595 95 ntBASIC1.36□□□□□ -2.19
Ccdc60Q8C4J0 Gm11794-201ENSMUST00000119446 237 ntBASIC1.35□□□□□ -2.19
Ccdc60Q8C4J0 Gm24629-201ENSMUST00000122762 89 ntBASIC1.35□□□□□ -2.19
Ccdc60Q8C4J0 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.35□□□□□ -2.19
Ccdc60Q8C4J0 Gm23208-201ENSMUST00000158666 127 ntBASIC1.35□□□□□ -2.19
Ccdc60Q8C4J0 Gm22862-201ENSMUST00000178593 121 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 155.8 ms