Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.5□□□□□ -2.17
Nup54Q8BTS4 Gm23845-201ENSMUST00000083834 152 ntBASIC1.5□□□□□ -2.17
Nup54Q8BTS4 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm14937-201ENSMUST00000119709 208 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm22082-201ENSMUST00000157587 161 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm22242-201ENSMUST00000175224 118 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm25035-201ENSMUST00000175414 77 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Mir5624-201ENSMUST00000176635 61 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm7958-201ENSMUST00000178255 468 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm7950-201ENSMUST00000179633 468 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm28008-201ENSMUST00000184021 186 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm27997-201ENSMUST00000184942 69 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm29147-201ENSMUST00000186846 315 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm29227-201ENSMUST00000187139 315 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm29034-201ENSMUST00000188099 315 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm28160-201ENSMUST00000191229 315 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm37129-201ENSMUST00000195791 315 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.49□□□□□ -2.17
Nup54Q8BTS4 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Gm25512-201ENSMUST00000083863 107 ntBASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Nup54Q8BTS4 Mir223-201ENSMUST00000102112 110 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm26080-201ENSMUST00000104069 131 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm23390-201ENSMUST00000157393 106 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm23221-201ENSMUST00000158118 93 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm22434-201ENSMUST00000158549 122 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm24668-201ENSMUST00000158935 104 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm27265-201ENSMUST00000183559 77 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm27493-201ENSMUST00000184128 78 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm5010-201ENSMUST00000213131 260 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm16976-205ENSMUST00000227324 226 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm24966-201ENSMUST00000082443 79 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm25357-201ENSMUST00000082745 72 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Snora3-201ENSMUST00000083082 132 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm23345-201ENSMUST00000083817 150 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Gm26107-201ENSMUST00000083972 107 ntBASIC1.48□□□□□ -2.17
Nup54Q8BTS4 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm24262-201ENSMUST00000157431 144 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm23122-201ENSMUST00000157645 103 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm22099-201ENSMUST00000157925 123 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm22315-201ENSMUST00000158010 143 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm24501-201ENSMUST00000158452 62 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm28579-201ENSMUST00000186143 369 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm28453-203ENSMUST00000187041 189 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm37693-201ENSMUST00000194562 234 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Mir465d-201ENSMUST00000196314 58 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm23370-201ENSMUST00000199545 130 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm44962-201ENSMUST00000206460 279 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Gm45673-201ENSMUST00000210293 358 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.47□□□□□ -2.17
Nup54Q8BTS4 Mir669o-201ENSMUST00000103898 96 ntBASIC1.46□□□□□ -2.18
Nup54Q8BTS4 Gm11794-201ENSMUST00000119446 237 ntBASIC1.46□□□□□ -2.18
Nup54Q8BTS4 Gm23656-201ENSMUST00000122626 112 ntBASIC1.46□□□□□ -2.18
Nup54Q8BTS4 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.46□□□□□ -2.18
Nup54Q8BTS4 Gm29818-201ENSMUST00000218070 165 ntBASIC1.46□□□□□ -2.18
Nup54Q8BTS4 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.46□□□□□ -2.18
Nup54Q8BTS4 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.46□□□□□ -2.18
Nup54Q8BTS4 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Nup54Q8BTS4 Gm26135-201ENSMUST00000101993 72 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Mir293-201ENSMUST00000104841 80 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm12512-201ENSMUST00000119620 217 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm11606-201ENSMUST00000120706 617 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm25914-201ENSMUST00000157618 153 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm24277-201ENSMUST00000158661 104 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Mir3057-201ENSMUST00000175040 91 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Snord50b-201ENSMUST00000178497 72 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm22448-201ENSMUST00000179254 107 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm27517-201ENSMUST00000184347 236 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Mir6419-201ENSMUST00000184784 113 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm28849-201ENSMUST00000188127 174 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm29308-201ENSMUST00000188863 315 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm28330-201ENSMUST00000190353 171 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Mir3087-201ENSMUST00000199405 56 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Mir7227-201ENSMUST00000200408 59 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Gm25930-201ENSMUST00000082785 107 ntBASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Nup54Q8BTS4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Mir767-201ENSMUST00000103256 107 ntBASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Gm15002-201ENSMUST00000118406 452 ntBASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Gm13725-201ENSMUST00000122139 207 ntBASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Gm22479-201ENSMUST00000122566 81 ntBASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Gm28912-201ENSMUST00000189001 234 ntBASIC1.44□□□□□ -2.18
Nup54Q8BTS4 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Gm24164-201ENSMUST00000093663 104 ntBASIC1.44□□□□□ -2.18
Nup54Q8BTS4 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.44□□□□□ -2.18
Nup54Q8BTS4 Mir669i-201ENSMUST00000117007 127 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 166.1 ms