Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm15069-201ENSMUST00000117792 192 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm15068-201ENSMUST00000119796 192 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm15190-201ENSMUST00000120855 276 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm27783-201ENSMUST00000183534 105 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm18433-202ENSMUST00000195682 196 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm44976-201ENSMUST00000205543 261 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm6109-201ENSMUST00000223297 348 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.07□□□□□ -1.92
Ubp1Q811S7 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ubp1Q811S7 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm44578-201ENSMUST00000207236 3835 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm24171-201ENSMUST00000104126 131 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm26477-201ENSMUST00000122617 323 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm23390-201ENSMUST00000157393 106 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm22338-201ENSMUST00000157715 129 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm24730-201ENSMUST00000158228 117 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm24634-201ENSMUST00000158672 107 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm26061-201ENSMUST00000175584 108 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm45492-201ENSMUST00000211611 288 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm24705-201ENSMUST00000082808 107 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 AF357341-201ENSMUST00000083088 75 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Ubp1Q811S7 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.06□□□□□ -1.92
Ubp1Q811S7 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ubp1Q811S7 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ubp1Q811S7 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ubp1Q811S7 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ubp1Q811S7 Gm13246-201ENSMUST00000120994 315 ntBASIC3.05□□□□□ -1.92
Ubp1Q811S7 Gm20672-201ENSMUST00000176605 261 ntBASIC3.05□□□□□ -1.92
Ubp1Q811S7 Mir8096-201ENSMUST00000184526 127 ntBASIC3.05□□□□□ -1.92
Ubp1Q811S7 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ubp1Q811S7 Gm29602-201ENSMUST00000186887 442 ntBASIC3.05□□□□□ -1.92
Ubp1Q811S7 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ubp1Q811S7 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ubp1Q811S7 Gm44921-201ENSMUST00000205290 301 ntBASIC3.05□□□□□ -1.92
Ubp1Q811S7 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.05□□□□□ -1.92
Ubp1Q811S7 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ubp1Q811S7 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.05□□□□□ -1.92
Ubp1Q811S7 Gm22681-201ENSMUST00000083853 106 ntBASIC3.05□□□□□ -1.92
Ubp1Q811S7 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Ubp1Q811S7 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ubp1Q811S7 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ubp1Q811S7 Gm14389-201ENSMUST00000140453 241 ntBASIC3.04□□□□□ -1.92
Ubp1Q811S7 Gm25828-201ENSMUST00000157087 95 ntBASIC3.04□□□□□ -1.92
Ubp1Q811S7 Gm22946-201ENSMUST00000158558 82 ntBASIC3.04□□□□□ -1.92
Ubp1Q811S7 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.04□□□□□ -1.92
Ubp1Q811S7 Snord61-201ENSMUST00000083176 71 ntBASIC3.04□□□□□ -1.92
Ubp1Q811S7 Mir201-201ENSMUST00000083470 66 ntBASIC3.04□□□□□ -1.92
Ubp1Q811S7 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ubp1Q811S7 Gm23113-201ENSMUST00000158477 99 ntBASIC3.03□□□□□ -1.92
Ubp1Q811S7 Gm42719-201ENSMUST00000197393 355 ntBASIC3.03□□□□□ -1.92
Ubp1Q811S7 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ubp1Q811S7 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.03□□□□□ -1.92
Ubp1Q811S7 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.03□□□□□ -1.92
Ubp1Q811S7 Gm24461-201ENSMUST00000082735 103 ntBASIC3.03□□□□□ -1.92
Ubp1Q811S7 Gm24410-201ENSMUST00000083433 107 ntBASIC3.03□□□□□ -1.92
Ubp1Q811S7 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ubp1Q811S7 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ubp1Q811S7 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.03□□□□□ -1.92
Ubp1Q811S7 Gm24213-201ENSMUST00000158255 258 ntBASIC3.02□□□□□ -1.93
Ubp1Q811S7 Gm44964-201ENSMUST00000207011 273 ntBASIC3.02□□□□□ -1.93
Ubp1Q811S7 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.02□□□□□ -1.93
Ubp1Q811S7 Gm24038-201ENSMUST00000082872 159 ntBASIC3.02□□□□□ -1.93
Ubp1Q811S7 Mir429-201ENSMUST00000083493 83 ntBASIC3.02□□□□□ -1.93
Ubp1Q811S7 Mir301-201ENSMUST00000083655 86 ntBASIC3.02□□□□□ -1.93
Ubp1Q811S7 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ubp1Q811S7 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ubp1Q811S7 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ubp1Q811S7 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Gm25270-201ENSMUST00000122606 138 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Gm24717-201ENSMUST00000157522 124 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Gm25882-201ENSMUST00000157784 85 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Gm23854-201ENSMUST00000158378 108 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Gm28358-202ENSMUST00000189292 223 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Gm18665-201ENSMUST00000189783 270 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Gm42960-201ENSMUST00000202160 241 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Gm24616-201ENSMUST00000083274 139 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 AF357428-201ENSMUST00000083815 69 ntBASIC3.01□□□□□ -1.93
Ubp1Q811S7 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Ubp1Q811S7 Gm22023-201ENSMUST00000104354 130 ntBASIC3□□□□□ -1.93
Ubp1Q811S7 Gm22279-201ENSMUST00000157200 93 ntBASIC3□□□□□ -1.93
Ubp1Q811S7 Gm25364-201ENSMUST00000158851 107 ntBASIC3□□□□□ -1.93
Ubp1Q811S7 Mir7578-201ENSMUST00000183455 82 ntBASIC3□□□□□ -1.93
Ubp1Q811S7 Gm44358-201ENSMUST00000196301 98 ntBASIC3□□□□□ -1.93
Ubp1Q811S7 Gm23297-201ENSMUST00000083184 127 ntBASIC3□□□□□ -1.93
Ubp1Q811S7 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3□□□□□ -1.93
Ubp1Q811S7 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
Ubp1Q811S7 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ubp1Q811S7 Mir693-201ENSMUST00000102187 89 ntBASIC2.99□□□□□ -1.93
Ubp1Q811S7 Gm24049-201ENSMUST00000102409 100 ntBASIC2.99□□□□□ -1.93
Ubp1Q811S7 Gm22497-201ENSMUST00000104499 131 ntBASIC2.99□□□□□ -1.93
Ubp1Q811S7 Gm24138-201ENSMUST00000157572 114 ntBASIC2.99□□□□□ -1.93
Ubp1Q811S7 Gm26297-201ENSMUST00000179464 132 ntBASIC2.99□□□□□ -1.93
Ubp1Q811S7 Mir6350-201ENSMUST00000183639 105 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms