Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm22348-201ENSMUST00000178674 79 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Gm23571-201ENSMUST00000180073 127 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Mir6481-201ENSMUST00000184617 110 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Gm27979-201ENSMUST00000185126 56 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Gm28849-201ENSMUST00000188127 174 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Gm44564-201ENSMUST00000207985 180 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Snora19-201ENSMUST00000082962 132 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Gm26493-201ENSMUST00000083155 136 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Gm23658-201ENSMUST00000083233 132 ntBASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Upk3bQ80YF6 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm24907-201ENSMUST00000116932 128 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 U6.1-201ENSMUST00000157443 101 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm25424-201ENSMUST00000157612 58 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm23858-201ENSMUST00000158384 106 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm25051-201ENSMUST00000158602 249 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm26022-201ENSMUST00000158663 108 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm26435-201ENSMUST00000179026 107 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Mir6379-201ENSMUST00000183392 115 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm27421-201ENSMUST00000184729 167 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm24151-201ENSMUST00000082758 141 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Mir301-201ENSMUST00000083655 86 ntBASIC1.63□□□□□ -2.15
Upk3bQ80YF6 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm23013-201ENSMUST00000104146 106 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm22488-201ENSMUST00000116811 127 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm25113-201ENSMUST00000157185 143 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm26345-201ENSMUST00000157534 120 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm25834-201ENSMUST00000158916 101 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm26157-201ENSMUST00000158974 126 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm24390-201ENSMUST00000179578 62 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm27793-201ENSMUST00000183405 76 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm27511-201ENSMUST00000183502 127 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm27544-201ENSMUST00000185069 155 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm42834-201ENSMUST00000196845 256 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm42578-201ENSMUST00000199960 194 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm42807-201ENSMUST00000200141 329 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Upk3bQ80YF6 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Gm18617-201ENSMUST00000222311 259 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Snord47-201ENSMUST00000083034 77 ntBASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Upk3bQ80YF6 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm24984-201ENSMUST00000104454 133 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Mir3096-201ENSMUST00000116685 71 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm23983-201ENSMUST00000157142 114 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm25914-201ENSMUST00000157618 153 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm22535-201ENSMUST00000158174 119 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm23760-201ENSMUST00000158350 116 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm25658-201ENSMUST00000158472 128 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm23090-201ENSMUST00000177331 78 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm22911-201ENSMUST00000177920 107 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm27878-201ENSMUST00000184000 106 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm27249-201ENSMUST00000185049 328 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm42960-201ENSMUST00000202160 241 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm35736-201ENSMUST00000203681 313 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm45386-201ENSMUST00000210194 218 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm26204-201ENSMUST00000082906 107 ntBASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Upk3bQ80YF6 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.61□□□□□ -2.15
Upk3bQ80YF6 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm24274-201ENSMUST00000116787 124 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm23988-201ENSMUST00000117034 122 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm14709-201ENSMUST00000121225 304 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm22337-201ENSMUST00000157721 132 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm24750-201ENSMUST00000157843 104 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm25863-201ENSMUST00000158249 329 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm26405-201ENSMUST00000158495 100 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm21885-201ENSMUST00000178891 327 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm37624-201ENSMUST00000193751 219 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.6□□□□□ -2.15
Upk3bQ80YF6 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm6109-201ENSMUST00000223297 348 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Gm24165-201ENSMUST00000082718 128 ntBASIC1.6□□□□□ -2.15
Upk3bQ80YF6 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm25094-201ENSMUST00000103992 131 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms