Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm10092-201ENSMUST00000077110 180 ntBASIC1.71□□□□□ -2.14
Trim58Q5NCC9 Gm24977-201ENSMUST00000083106 163 ntBASIC1.71□□□□□ -2.14
Trim58Q5NCC9 Gm22972-201ENSMUST00000083297 131 ntBASIC1.71□□□□□ -2.14
Trim58Q5NCC9 Snora33-201ENSMUST00000093556 129 ntBASIC1.71□□□□□ -2.14
Trim58Q5NCC9 Gm25421-201ENSMUST00000104218 164 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm16162-201ENSMUST00000162296 297 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm20438-201ENSMUST00000174441 329 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm23090-201ENSMUST00000177331 78 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm38060-201ENSMUST00000194822 464 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm26493-201ENSMUST00000083155 136 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm26175-201ENSMUST00000083794 131 ntBASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Trim58Q5NCC9 Gm24116-201ENSMUST00000103975 107 ntBASIC1.69□□□□□ -2.14
Trim58Q5NCC9 Gm23015-201ENSMUST00000104145 128 ntBASIC1.69□□□□□ -2.14
Trim58Q5NCC9 Gm25111-201ENSMUST00000116686 147 ntBASIC1.69□□□□□ -2.14
Trim58Q5NCC9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.69□□□□□ -2.14
Trim58Q5NCC9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.69□□□□□ -2.14
Trim58Q5NCC9 Gm37763-201ENSMUST00000193445 120 ntBASIC1.69□□□□□ -2.14
Trim58Q5NCC9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Trim58Q5NCC9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trim58Q5NCC9 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm12309-201ENSMUST00000119889 182 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm22883-201ENSMUST00000157376 106 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm22675-201ENSMUST00000158430 104 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm24333-201ENSMUST00000175101 84 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm28724-201ENSMUST00000186149 625 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.68□□□□□ -2.14
Trim58Q5NCC9 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm22299-201ENSMUST00000082663 136 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm26497-201ENSMUST00000083146 107 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm26495-201ENSMUST00000083152 137 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm24615-201ENSMUST00000083268 113 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm25789-201ENSMUST00000083294 76 ntBASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trim58Q5NCC9 Gm23013-201ENSMUST00000104146 106 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Gm12143-201ENSMUST00000119666 332 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Gm23983-201ENSMUST00000157142 114 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Gm22281-201ENSMUST00000157198 103 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Gm28330-201ENSMUST00000190353 171 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Mir465d-201ENSMUST00000196314 58 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.67□□□□□ -2.14
Trim58Q5NCC9 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trim58Q5NCC9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trim58Q5NCC9 Gm24283-201ENSMUST00000104233 107 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm24079-201ENSMUST00000104352 132 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm13588-201ENSMUST00000120026 135 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm26479-201ENSMUST00000122620 106 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm23982-201ENSMUST00000157141 106 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Snord13-201ENSMUST00000157627 104 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm24818-201ENSMUST00000175093 161 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm25615-201ENSMUST00000177836 94 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm24638-201ENSMUST00000179807 132 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm18546-201ENSMUST00000197245 676 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm42807-201ENSMUST00000200141 329 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm42960-201ENSMUST00000202160 241 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm45907-201ENSMUST00000213023 193 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 Gm9795-201ENSMUST00000062156 693 ntBASIC1.66□□□□□ -2.14
Trim58Q5NCC9 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm23011-201ENSMUST00000104148 132 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Mir669g-201ENSMUST00000116809 123 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm12417-201ENSMUST00000119153 403 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm14922-201ENSMUST00000121131 163 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm25664-201ENSMUST00000157697 107 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm22099-201ENSMUST00000157925 123 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm23181-201ENSMUST00000158685 110 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Mir28b-201ENSMUST00000175399 80 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm27747-201ENSMUST00000184707 85 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm21064-202ENSMUST00000190583 278 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm37918-201ENSMUST00000192071 120 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Snord43-201ENSMUST00000199549 108 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Gm45543-201ENSMUST00000209327 88 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Mir29c-201ENSMUST00000083614 88 ntBASIC1.65□□□□□ -2.15
Trim58Q5NCC9 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm25832-201ENSMUST00000104140 130 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm12797-201ENSMUST00000118645 273 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm22027-201ENSMUST00000122737 127 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm24837-201ENSMUST00000158683 81 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm25643-201ENSMUST00000158874 103 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm23977-201ENSMUST00000177871 74 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 184.9 ms