Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm26342-201ENSMUST00000104557 129 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Mir875-201ENSMUST00000104698 78 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm24225-201ENSMUST00000158825 98 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Snord50b-201ENSMUST00000178497 72 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm23003-201ENSMUST00000179948 107 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim40Q3UWA4 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm9795-201ENSMUST00000062156 693 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm26495-201ENSMUST00000083152 137 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm23100-201ENSMUST00000083455 141 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm10222-201ENSMUST00000088336 294 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Trim40Q3UWA4 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.52□□□□□ -2.17
Trim40Q3UWA4 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm25541-201ENSMUST00000116888 126 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm14922-201ENSMUST00000121131 163 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm22321-201ENSMUST00000157152 104 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm24358-201ENSMUST00000158424 288 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm29140-201ENSMUST00000190187 476 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm37889-201ENSMUST00000194174 251 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm23970-201ENSMUST00000083319 107 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm23039-201ENSMUST00000083870 161 ntBASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trim40Q3UWA4 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm25279-201ENSMUST00000122608 133 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm24440-201ENSMUST00000157236 63 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm23390-201ENSMUST00000157393 106 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm22665-201ENSMUST00000158720 275 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm24174-201ENSMUST00000158933 111 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm24512-201ENSMUST00000174963 65 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm25730-201ENSMUST00000178753 165 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm27265-201ENSMUST00000183559 77 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm27747-201ENSMUST00000184707 85 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm42774-201ENSMUST00000198854 283 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm5010-201ENSMUST00000213131 260 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm25357-201ENSMUST00000082745 72 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm22683-201ENSMUST00000082854 137 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Gm23451-201ENSMUST00000083328 122 ntBASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Trim40Q3UWA4 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm25111-201ENSMUST00000116686 147 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm14001-201ENSMUST00000118847 247 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm13433-201ENSMUST00000121701 240 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm25642-201ENSMUST00000175137 66 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm22118-201ENSMUST00000175593 171 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm25936-201ENSMUST00000179952 114 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Mir7683-201ENSMUST00000183842 61 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm27421-201ENSMUST00000184729 167 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm29603-201ENSMUST00000186792 334 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm37693-201ENSMUST00000194562 234 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm44352-201ENSMUST00000196358 110 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm44962-201ENSMUST00000206460 279 ntBASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim40Q3UWA4 Gm14937-201ENSMUST00000119709 208 ntBASIC1.49□□□□□ -2.17
Trim40Q3UWA4 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.49□□□□□ -2.17
Trim40Q3UWA4 Gm23536-201ENSMUST00000157541 134 ntBASIC1.49□□□□□ -2.17
Trim40Q3UWA4 Gm25914-201ENSMUST00000157618 153 ntBASIC1.49□□□□□ -2.17
Trim40Q3UWA4 Mir3092-201ENSMUST00000174954 96 ntBASIC1.49□□□□□ -2.17
Trim40Q3UWA4 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.49□□□□□ -2.17
Trim40Q3UWA4 Gm23370-201ENSMUST00000199545 130 ntBASIC1.49□□□□□ -2.17
Trim40Q3UWA4 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trim40Q3UWA4 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Trim40Q3UWA4 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Gm11388-201ENSMUST00000120908 159 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Gm6025-201ENSMUST00000121517 201 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Gm23656-201ENSMUST00000122626 112 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Gm24668-201ENSMUST00000158935 104 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Gm28912-201ENSMUST00000189001 234 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Snora3-201ENSMUST00000083082 132 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Mir155-201ENSMUST00000083463 65 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Mir322-201ENSMUST00000083484 95 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Gm25513-201ENSMUST00000083861 162 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trim40Q3UWA4 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.48□□□□□ -2.17
Trim40Q3UWA4 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Mir293-201ENSMUST00000104841 80 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm14792-201ENSMUST00000119725 258 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm14883-201ENSMUST00000120179 157 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm14491-201ENSMUST00000121919 199 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm24909-201ENSMUST00000157290 280 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm26022-201ENSMUST00000158663 108 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm24677-201ENSMUST00000158755 150 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm25615-201ENSMUST00000177836 94 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Mir6419-201ENSMUST00000184784 113 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 163.6 ms