Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 Gm24356-201ENSMUST00000082859 106 ntBASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 Gm25789-201ENSMUST00000083294 76 ntBASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm25496-201ENSMUST00000104430 120 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm25544-201ENSMUST00000122676 120 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm22515-201ENSMUST00000158273 305 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm25011-201ENSMUST00000158398 126 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm24277-201ENSMUST00000158661 104 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Mir6540-201ENSMUST00000184886 108 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm28343-201ENSMUST00000185386 112 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm28661-201ENSMUST00000188231 681 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm37713-201ENSMUST00000191746 198 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm44726-201ENSMUST00000203427 217 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm25650-201ENSMUST00000083784 162 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm23041-201ENSMUST00000083868 106 ntBASIC0.73□□□□□ -2.29
Upf3bQ3ULL6 Gm11794-201ENSMUST00000119446 237 ntBASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Gm14287-201ENSMUST00000121060 117 ntBASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Gm23016-201ENSMUST00000158431 62 ntBASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Gm27545-201ENSMUST00000184755 202 ntBASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Gm43220-201ENSMUST00000199299 282 ntBASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Gm44396-201ENSMUST00000199843 114 ntBASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Gm44010-201ENSMUST00000204432 331 ntBASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.72□□□□□ -2.29
Upf3bQ3ULL6 Mir695-201ENSMUST00000102261 109 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm23991-201ENSMUST00000117033 93 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm22841-201ENSMUST00000158443 62 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm25750-201ENSMUST00000175483 112 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm22802-201ENSMUST00000175621 89 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm23355-201ENSMUST00000177614 107 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm24799-201ENSMUST00000178431 79 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm10264-201ENSMUST00000220589 429 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm24152-201ENSMUST00000082764 163 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm23055-201ENSMUST00000082805 94 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Gm23721-201ENSMUST00000083005 107 ntBASIC0.71□□□□□ -2.3
Upf3bQ3ULL6 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Gm23169-201ENSMUST00000157157 112 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Gm23379-201ENSMUST00000180026 107 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Gm26968-201ENSMUST00000182894 481 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Mir6346-201ENSMUST00000183982 81 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Gm44490-201ENSMUST00000198566 127 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Gm44830-201ENSMUST00000207667 584 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Gm24920-201ENSMUST00000083018 85 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Snord32a-201ENSMUST00000083285 83 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Mir10b-201ENSMUST00000083566 68 ntBASIC0.7□□□□□ -2.3
Upf3bQ3ULL6 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm26338-201ENSMUST00000102372 110 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm11859-201ENSMUST00000118099 455 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm14980-201ENSMUST00000121247 736 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm11389-201ENSMUST00000121407 430 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm25102-201ENSMUST00000122479 112 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm24401-201ENSMUST00000157868 91 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm23542-201ENSMUST00000158208 96 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm25044-201ENSMUST00000158603 104 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Snora24-201ENSMUST00000174989 130 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm29640-201ENSMUST00000187972 278 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm18213-201ENSMUST00000207850 178 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm24311-201ENSMUST00000082570 104 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm22884-201ENSMUST00000083127 140 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm25578-201ENSMUST00000083406 104 ntBASIC0.69□□□□□ -2.3
Upf3bQ3ULL6 Gm14782-201ENSMUST00000120151 195 ntBASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm25805-201ENSMUST00000122788 108 ntBASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm16358-201ENSMUST00000146046 210 ntBASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm25901-201ENSMUST00000158494 130 ntBASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm25166-201ENSMUST00000158909 111 ntBASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm25314-201ENSMUST00000178810 79 ntBASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 127.2 ms