Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm24313-201ENSMUST00000082561 133 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm26126-201ENSMUST00000083188 164 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Snord72-201ENSMUST00000104549 81 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm24683-201ENSMUST00000104840 88 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm24907-201ENSMUST00000116932 128 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm25783-201ENSMUST00000122525 190 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm26279-201ENSMUST00000157095 102 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm24573-201ENSMUST00000175499 112 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm27476-201ENSMUST00000183366 104 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm44352-201ENSMUST00000196358 110 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm43676-201ENSMUST00000197532 540 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm43865-201ENSMUST00000204721 127 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm44563-201ENSMUST00000207958 178 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm6109-201ENSMUST00000223297 348 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Ssbp4Q3U4B1 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm12512-201ENSMUST00000119620 217 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm15281-201ENSMUST00000125181 351 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm24440-201ENSMUST00000157236 63 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm25015-201ENSMUST00000158400 128 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm24512-201ENSMUST00000174963 65 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm28992-201ENSMUST00000190534 139 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm44666-201ENSMUST00000208544 391 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm23461-201ENSMUST00000083265 107 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Gm22744-201ENSMUST00000083444 65 ntBASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Ssbp4Q3U4B1 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
Ssbp4Q3U4B1 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm24283-201ENSMUST00000104233 107 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Snord19-201ENSMUST00000104609 76 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm22217-201ENSMUST00000157556 313 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Mir1967-201ENSMUST00000157789 82 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Snord11-201ENSMUST00000158468 84 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm25488-201ENSMUST00000158728 118 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm25834-201ENSMUST00000158916 101 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm17052-201ENSMUST00000165496 289 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm25996-201ENSMUST00000175393 117 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Mir3069-201ENSMUST00000198802 65 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm18617-201ENSMUST00000222311 259 ntBASIC1.77□□□□□ -2.13
Ssbp4Q3U4B1 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Gm24598-201ENSMUST00000122510 74 ntBASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Gm16510-201ENSMUST00000153501 249 ntBASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Gm24977-201ENSMUST00000083106 163 ntBASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Ssbp4Q3U4B1 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm26135-201ENSMUST00000101993 72 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm23988-201ENSMUST00000117034 122 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm15692-201ENSMUST00000152173 352 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm22803-201ENSMUST00000158049 283 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm17161-201ENSMUST00000169187 524 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Snord50b-201ENSMUST00000178497 72 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm44182-201ENSMUST00000204052 115 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm22248-201ENSMUST00000082482 150 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Snord82-201ENSMUST00000082889 70 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Snord47-201ENSMUST00000083034 77 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm22972-201ENSMUST00000083297 131 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm24453-201ENSMUST00000083346 76 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Gm10360-201ENSMUST00000097219 272 ntBASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ssbp4Q3U4B1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms