Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm24356-201ENSMUST00000082859 106 ntBASIC1.96□□□□□ -2.1
NcanP55066 Mir221-201ENSMUST00000083488 95 ntBASIC1.96□□□□□ -2.1
NcanP55066 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.96□□□□□ -2.1
NcanP55066 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NcanP55066 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm12351-201ENSMUST00000118727 292 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm11794-201ENSMUST00000119446 237 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm14748-201ENSMUST00000119819 411 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm15213-201ENSMUST00000122098 216 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm25805-201ENSMUST00000122788 108 ntBASIC1.95□□□□□ -2.1
NcanP55066 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm20613-201ENSMUST00000175828 345 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm23355-201ENSMUST00000177614 107 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm25450-201ENSMUST00000179144 107 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm23148-201ENSMUST00000180367 107 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm44564-201ENSMUST00000207985 180 ntBASIC1.95□□□□□ -2.1
NcanP55066 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.95□□□□□ -2.1
NcanP55066 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm6109-201ENSMUST00000223297 348 ntBASIC1.95□□□□□ -2.1
NcanP55066 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm25038-201ENSMUST00000082928 130 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm22571-201ENSMUST00000082984 70 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm25258-201ENSMUST00000083049 107 ntBASIC1.95□□□□□ -2.1
NcanP55066 Gm23451-201ENSMUST00000083328 122 ntBASIC1.95□□□□□ -2.1
NcanP55066 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
NcanP55066 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.94□□□□□ -2.1
NcanP55066 Gm11572-201ENSMUST00000119164 120 ntBASIC1.94□□□□□ -2.1
NcanP55066 Gm24598-201ENSMUST00000122510 74 ntBASIC1.94□□□□□ -2.1
NcanP55066 Gm24896-201ENSMUST00000122741 135 ntBASIC1.94□□□□□ -2.1
NcanP55066 Gm23542-201ENSMUST00000158208 96 ntBASIC1.94□□□□□ -2.1
NcanP55066 Gm23474-201ENSMUST00000158884 75 ntBASIC1.94□□□□□ -2.1
NcanP55066 Gm27521-201ENSMUST00000184022 64 ntBASIC1.94□□□□□ -2.1
NcanP55066 Mir7021-201ENSMUST00000197026 63 ntBASIC1.94□□□□□ -2.1
NcanP55066 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.94□□□□□ -2.1
NcanP55066 Gm25124-201ENSMUST00000083345 164 ntBASIC1.94□□□□□ -2.1
NcanP55066 Mir30d-201ENSMUST00000083503 82 ntBASIC1.94□□□□□ -2.1
NcanP55066 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
NcanP55066 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.94□□□□□ -2.1
NcanP55066 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NcanP55066 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm15526-201ENSMUST00000112504 204 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm14792-201ENSMUST00000119725 258 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm14782-201ENSMUST00000120151 195 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm13967-201ENSMUST00000120404 380 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm13992-201ENSMUST00000120558 156 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm12926-201ENSMUST00000121158 409 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NcanP55066 Gm23324-201ENSMUST00000157421 131 ntBASIC1.93□□□□□ -2.1
NcanP55066 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.93□□□□□ -2.1
NcanP55066 Mir466e-201ENSMUST00000198862 84 ntBASIC1.93□□□□□ -2.1
NcanP55066 Mir1291-201ENSMUST00000199842 117 ntBASIC1.93□□□□□ -2.1
NcanP55066 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm29818-201ENSMUST00000218070 165 ntBASIC1.93□□□□□ -2.1
NcanP55066 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.93□□□□□ -2.1
NcanP55066 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.93□□□□□ -2.1
NcanP55066 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NcanP55066 Snora34-201ENSMUST00000083402 138 ntBASIC1.93□□□□□ -2.1
NcanP55066 Mir93-201ENSMUST00000083593 88 ntBASIC1.93□□□□□ -2.1
NcanP55066 Gm24522-201ENSMUST00000083964 108 ntBASIC1.93□□□□□ -2.1
NcanP55066 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.93□□□□□ -2.1
NcanP55066 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NcanP55066 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NcanP55066 Gm26249-201ENSMUST00000116708 118 ntBASIC1.92□□□□□ -2.1
NcanP55066 Gm6985-201ENSMUST00000121255 271 ntBASIC1.92□□□□□ -2.1
NcanP55066 Gm23469-201ENSMUST00000157131 104 ntBASIC1.92□□□□□ -2.1
NcanP55066 Gm25253-201ENSMUST00000179958 107 ntBASIC1.92□□□□□ -2.1
NcanP55066 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NcanP55066 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.92□□□□□ -2.1
NcanP55066 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm13714-201ENSMUST00000117313 221 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm11936-201ENSMUST00000118323 160 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm15002-201ENSMUST00000118406 452 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm15115-201ENSMUST00000121145 264 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NcanP55066 Gm25115-201ENSMUST00000157187 140 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm27723-201ENSMUST00000157398 63 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm25643-201ENSMUST00000158874 103 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm23047-201ENSMUST00000177661 94 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm17067-202ENSMUST00000180131 123 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.91□□□□□ -2.1
NcanP55066 Gm37586-201ENSMUST00000193654 204 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm44482-201ENSMUST00000199232 103 ntBASIC1.91□□□□□ -2.1
NcanP55066 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm45386-201ENSMUST00000210194 218 ntBASIC1.91□□□□□ -2.1
NcanP55066 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.91□□□□□ -2.1
NcanP55066 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NcanP55066 Gm25078-201ENSMUST00000082530 107 ntBASIC1.91□□□□□ -2.1
NcanP55066 Mir29c-201ENSMUST00000083614 88 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NcanP55066 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.91□□□□□ -2.1
NcanP55066 Gm12721-201ENSMUST00000120621 268 ntBASIC1.9□□□□□ -2.11
NcanP55066 Gm24909-201ENSMUST00000157290 280 ntBASIC1.9□□□□□ -2.11
NcanP55066 Gm25718-201ENSMUST00000158632 118 ntBASIC1.9□□□□□ -2.11
NcanP55066 Mir3098-201ENSMUST00000175416 87 ntBASIC1.9□□□□□ -2.11
NcanP55066 Gm27747-201ENSMUST00000184707 85 ntBASIC1.9□□□□□ -2.11
NcanP55066 Gm37778-201ENSMUST00000191732 190 ntBASIC1.9□□□□□ -2.11
NcanP55066 Gm19901-201ENSMUST00000192191 495 ntBASIC1.9□□□□□ -2.11
NcanP55066 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.9□□□□□ -2.11
NcanP55066 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 203.1 ms