Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm23260-201ENSMUST00000158317 172 ntBASIC2.6□□□□□ -1.99
LdlrP35951 Mir3076-201ENSMUST00000175415 60 ntBASIC2.6□□□□□ -1.99
LdlrP35951 Gm25464-201ENSMUST00000175481 107 ntBASIC2.6□□□□□ -1.99
LdlrP35951 Gm22775-201ENSMUST00000177630 120 ntBASIC2.6□□□□□ -1.99
LdlrP35951 Gm23569-201ENSMUST00000180120 120 ntBASIC2.6□□□□□ -1.99
LdlrP35951 Gm37796-201ENSMUST00000195327 134 ntBASIC2.6□□□□□ -1.99
LdlrP35951 Gm42855-201ENSMUST00000197388 253 ntBASIC2.6□□□□□ -1.99
LdlrP35951 Gm10172-201ENSMUST00000085929 558 ntBASIC2.6□□□□□ -1.99
LdlrP35951 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.59□□□□□ -1.99
LdlrP35951 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
LdlrP35951 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
LdlrP35951 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.59□□□□□ -1.99
LdlrP35951 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.59□□□□□ -1.99
LdlrP35951 Snora36b-201ENSMUST00000104383 132 ntBASIC2.59□□□□□ -1.99
LdlrP35951 Gm25500-201ENSMUST00000104426 123 ntBASIC2.59□□□□□ -1.99
LdlrP35951 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.59□□□□□ -1.99
LdlrP35951 Gm28900-201ENSMUST00000185232 156 ntBASIC2.59□□□□□ -1.99
LdlrP35951 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.59□□□□□ -1.99
LdlrP35951 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.59□□□□□ -1.99
LdlrP35951 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.59□□□□□ -1.99
LdlrP35951 Mir186-201ENSMUST00000083497 71 ntBASIC2.59□□□□□ -1.99
LdlrP35951 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.59□□□□□ -1.99
LdlrP35951 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
LdlrP35951 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
LdlrP35951 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
LdlrP35951 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.59□□□□□ -2
LdlrP35951 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LdlrP35951 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
LdlrP35951 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LdlrP35951 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LdlrP35951 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
LdlrP35951 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.58□□□□□ -2
LdlrP35951 Gm26247-201ENSMUST00000116702 91 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm9009-201ENSMUST00000117321 326 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm22477-201ENSMUST00000122569 316 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm23655-201ENSMUST00000122627 105 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm26411-201ENSMUST00000157668 107 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm25012-201ENSMUST00000158396 164 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm22858-201ENSMUST00000174972 76 ntBASIC2.58□□□□□ -2
LdlrP35951 Mir6402-201ENSMUST00000183406 80 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.58□□□□□ -2
LdlrP35951 Gm15235-201ENSMUST00000200572 194 ntBASIC2.58□□□□□ -2
LdlrP35951 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm26493-201ENSMUST00000083155 136 ntBASIC2.58□□□□□ -2
LdlrP35951 Gm26265-201ENSMUST00000083277 135 ntBASIC2.58□□□□□ -2
LdlrP35951 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
LdlrP35951 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
LdlrP35951 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
LdlrP35951 Gm24274-201ENSMUST00000116787 124 ntBASIC2.57□□□□□ -2
LdlrP35951 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.57□□□□□ -2
LdlrP35951 Gm24480-201ENSMUST00000157442 103 ntBASIC2.57□□□□□ -2
LdlrP35951 Gm20718-201ENSMUST00000176058 259 ntBASIC2.57□□□□□ -2
LdlrP35951 Mir6353-201ENSMUST00000183596 113 ntBASIC2.57□□□□□ -2
LdlrP35951 Gm44052-201ENSMUST00000203382 396 ntBASIC2.57□□□□□ -2
LdlrP35951 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.57□□□□□ -2
LdlrP35951 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.57□□□□□ -2
LdlrP35951 Gm25987-201ENSMUST00000083234 107 ntBASIC2.57□□□□□ -2
LdlrP35951 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.57□□□□□ -2
LdlrP35951 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
LdlrP35951 Gm22270-201ENSMUST00000104034 132 ntBASIC2.56□□□□□ -2
LdlrP35951 Mir466k-201ENSMUST00000116774 122 ntBASIC2.56□□□□□ -2
LdlrP35951 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.56□□□□□ -2
LdlrP35951 Mir378a-201ENSMUST00000198300 66 ntBASIC2.56□□□□□ -2
LdlrP35951 Mir1291-201ENSMUST00000199842 117 ntBASIC2.56□□□□□ -2
LdlrP35951 Gm45492-201ENSMUST00000211611 288 ntBASIC2.56□□□□□ -2
LdlrP35951 Snora34-201ENSMUST00000083402 138 ntBASIC2.56□□□□□ -2
LdlrP35951 Gm23095-201ENSMUST00000083446 107 ntBASIC2.56□□□□□ -2
LdlrP35951 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.56□□□□□ -2
LdlrP35951 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.56□□□□□ -2
LdlrP35951 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LdlrP35951 Gm22678-201ENSMUST00000116974 101 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm13913-201ENSMUST00000121126 260 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm15214-201ENSMUST00000122155 470 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm23600-201ENSMUST00000157260 71 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm24717-201ENSMUST00000157522 124 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm26160-201ENSMUST00000158965 63 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LdlrP35951 Mir6905-201ENSMUST00000184228 70 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm37807-201ENSMUST00000194310 190 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm37037-201ENSMUST00000194475 424 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm43587-201ENSMUST00000199590 204 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm43901-201ENSMUST00000203247 453 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm44459-201ENSMUST00000203926 160 ntBASIC2.55□□□□□ -2
LdlrP35951 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.55□□□□□ -2
LdlrP35951 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm22681-201ENSMUST00000083853 106 ntBASIC2.55□□□□□ -2
LdlrP35951 Gm23040-201ENSMUST00000083869 163 ntBASIC2.55□□□□□ -2
LdlrP35951 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LdlrP35951 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.55□□□□□ -2
LdlrP35951 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LdlrP35951 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LdlrP35951 Gm22666-201ENSMUST00000158717 164 ntBASIC2.54□□□□□ -2
LdlrP35951 Mir28b-201ENSMUST00000175399 80 ntBASIC2.54□□□□□ -2
LdlrP35951 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.54□□□□□ -2
LdlrP35951 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.54□□□□□ -2
LdlrP35951 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.54□□□□□ -2
LdlrP35951 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LdlrP35951 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.53□□□□□ -2
LdlrP35951 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
LdlrP35951 Gm22003-201ENSMUST00000101885 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms