Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm25654-201ENSMUST00000158467 88 ntBASIC2.07□□□□□ -2.08
Cbx4O55187 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.07□□□□□ -2.08
Cbx4O55187 Gm20438-201ENSMUST00000174441 329 ntBASIC2.07□□□□□ -2.08
Cbx4O55187 Gm24510-201ENSMUST00000174965 94 ntBASIC2.07□□□□□ -2.08
Cbx4O55187 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cbx4O55187 Gm27878-201ENSMUST00000184000 106 ntBASIC2.07□□□□□ -2.08
Cbx4O55187 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.07□□□□□ -2.08
Cbx4O55187 Gm18546-201ENSMUST00000197245 676 ntBASIC2.07□□□□□ -2.08
Cbx4O55187 Gm45508-201ENSMUST00000209298 299 ntBASIC2.07□□□□□ -2.08
Cbx4O55187 Gm6109-201ENSMUST00000223297 348 ntBASIC2.07□□□□□ -2.08
Cbx4O55187 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Cbx4O55187 Gm22248-201ENSMUST00000082482 150 ntBASIC2.07□□□□□ -2.08
Cbx4O55187 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Cbx4O55187 Gm13433-201ENSMUST00000121701 240 ntBASIC2.06□□□□□ -2.08
Cbx4O55187 Mir1967-201ENSMUST00000157789 82 ntBASIC2.06□□□□□ -2.08
Cbx4O55187 Gm25015-201ENSMUST00000158400 128 ntBASIC2.06□□□□□ -2.08
Cbx4O55187 Gm26022-201ENSMUST00000158663 108 ntBASIC2.06□□□□□ -2.08
Cbx4O55187 Gm29604-201ENSMUST00000187176 163 ntBASIC2.06□□□□□ -2.08
Cbx4O55187 Gm37746-201ENSMUST00000193249 198 ntBASIC2.06□□□□□ -2.08
Cbx4O55187 Gm45456-201ENSMUST00000210841 243 ntBASIC2.06□□□□□ -2.08
Cbx4O55187 Gm22744-201ENSMUST00000083444 65 ntBASIC2.06□□□□□ -2.08
Cbx4O55187 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Cbx4O55187 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Cbx4O55187 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Cbx4O55187 Gm25961-201ENSMUST00000157174 135 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Gm23545-201ENSMUST00000158205 104 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Gm26405-201ENSMUST00000158495 100 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Gm22664-201ENSMUST00000158719 105 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Gm29262-201ENSMUST00000190084 196 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Gm37557-201ENSMUST00000191640 139 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.05□□□□□ -2.08
Cbx4O55187 Gm45386-201ENSMUST00000210194 218 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Snora69-201ENSMUST00000083708 131 ntBASIC2.05□□□□□ -2.08
Cbx4O55187 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
Cbx4O55187 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Cbx4O55187 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm26154-201ENSMUST00000102339 96 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Snord19-201ENSMUST00000104609 76 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm26026-201ENSMUST00000122726 123 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm23983-201ENSMUST00000157142 114 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm22554-201ENSMUST00000157798 147 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm22731-201ENSMUST00000158086 94 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm23182-201ENSMUST00000158688 135 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.04□□□□□ -2.08
Cbx4O55187 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm18617-201ENSMUST00000222311 259 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.04□□□□□ -2.08
Cbx4O55187 Gm25204-201ENSMUST00000082843 106 ntBASIC2.04□□□□□ -2.08
Cbx4O55187 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Cbx4O55187 Gm22935-201ENSMUST00000103960 104 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Gm26150-201ENSMUST00000157426 151 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Mir1951-201ENSMUST00000157981 89 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Gm24837-201ENSMUST00000158683 81 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Gm16584-201ENSMUST00000159267 189 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Gm25996-201ENSMUST00000175393 117 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Cbx4O55187 Gm44491-201ENSMUST00000196794 96 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 Gm10360-201ENSMUST00000097219 272 ntBASIC2.03□□□□□ -2.08
Cbx4O55187 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Cbx4O55187 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Cbx4O55187 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Cbx4O55187 Gm14748-201ENSMUST00000119819 411 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm25783-201ENSMUST00000122525 190 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm22217-201ENSMUST00000157556 313 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm25424-201ENSMUST00000157612 58 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm22338-201ENSMUST00000157715 129 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm24277-201ENSMUST00000158661 104 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm23864-201ENSMUST00000177607 107 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm22264-201ENSMUST00000178200 107 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm22510-201ENSMUST00000179304 79 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm26336-201ENSMUST00000179449 79 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm26390-201ENSMUST00000179628 79 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm27585-201ENSMUST00000183717 199 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Mir7016-201ENSMUST00000184308 72 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Gm35736-201ENSMUST00000203681 313 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Cbx4O55187 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.02□□□□□ -2.09
Cbx4O55187 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Cbx4O55187 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Cbx4O55187 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Cbx4O55187 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Cbx4O55187 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Cbx4O55187 Gm25094-201ENSMUST00000103992 131 ntBASIC2.01□□□□□ -2.09
Cbx4O55187 Gm12941-201ENSMUST00000117934 220 ntBASIC2.01□□□□□ -2.09
Cbx4O55187 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.01□□□□□ -2.09
Cbx4O55187 Gm25460-201ENSMUST00000157954 127 ntBASIC2.01□□□□□ -2.09
Cbx4O55187 Gm25491-201ENSMUST00000158733 308 ntBASIC2.01□□□□□ -2.09
Cbx4O55187 Gm16162-201ENSMUST00000162296 297 ntBASIC2.01□□□□□ -2.09
Cbx4O55187 Gm23090-201ENSMUST00000177331 78 ntBASIC2.01□□□□□ -2.09
Cbx4O55187 Mir93-201ENSMUST00000083593 88 ntBASIC2.01□□□□□ -2.09
Cbx4O55187 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 138 ms