Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm22615-201ENSMUST00000158102 70 ntBASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 Gm23759-201ENSMUST00000158351 268 ntBASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 Gm23581-201ENSMUST00000158531 63 ntBASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 Gm25247-201ENSMUST00000175475 90 ntBASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 Gm29397-201ENSMUST00000185205 333 ntBASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 Gm44655-201ENSMUST00000207768 423 ntBASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 Gm9318-201ENSMUST00000222444 438 ntBASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 Gm25788-201ENSMUST00000082721 131 ntBASIC1.23□□□□□ -2.21
Col4a4Q9QZR9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm13725-201ENSMUST00000122139 207 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm23184-201ENSMUST00000122594 131 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm27510-201ENSMUST00000158214 64 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm25901-201ENSMUST00000158494 130 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm23579-201ENSMUST00000158528 103 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm25362-201ENSMUST00000158854 105 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Snora24-201ENSMUST00000174989 130 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm27997-201ENSMUST00000184942 69 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Mir7116-201ENSMUST00000195956 70 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm23451-201ENSMUST00000083328 122 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Gm25896-201ENSMUST00000083713 136 ntBASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Col4a4Q9QZR9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm11798-201ENSMUST00000119150 421 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm12309-201ENSMUST00000119889 182 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm11904-201ENSMUST00000120562 248 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm16358-201ENSMUST00000146046 210 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm23331-201ENSMUST00000157423 108 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm23589-201ENSMUST00000157660 105 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm23262-201ENSMUST00000158323 168 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm25718-201ENSMUST00000158632 118 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm25166-201ENSMUST00000158909 111 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm24487-201ENSMUST00000178017 63 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm26200-201ENSMUST00000180273 79 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Mir7079-201ENSMUST00000184697 69 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm3724-201ENSMUST00000197957 349 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm22358-201ENSMUST00000082877 122 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm22443-201ENSMUST00000082890 107 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm23462-201ENSMUST00000083264 104 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Mir300-201ENSMUST00000083485 79 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Gm25188-201ENSMUST00000083913 122 ntBASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col4a4Q9QZR9 Snord70-201ENSMUST00000104157 87 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm24846-201ENSMUST00000158033 108 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm24726-201ENSMUST00000158232 121 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm17113-201ENSMUST00000170118 171 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm22951-201ENSMUST00000179471 107 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm28849-201ENSMUST00000188127 174 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm28330-201ENSMUST00000190353 171 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm29665-201ENSMUST00000191457 528 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm44182-201ENSMUST00000204052 115 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm44977-201ENSMUST00000205283 420 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm45616-201ENSMUST00000211711 319 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Mir301-201ENSMUST00000083655 86 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm25651-201ENSMUST00000083782 119 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm13577-201ENSMUST00000121365 205 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm25961-201ENSMUST00000157174 135 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm23232-201ENSMUST00000157300 105 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm25711-201ENSMUST00000158633 128 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm23355-201ENSMUST00000177614 107 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm23148-201ENSMUST00000180367 107 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm37338-201ENSMUST00000191986 127 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm36891-201ENSMUST00000191995 655 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm43865-201ENSMUST00000204721 127 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm25258-201ENSMUST00000083049 107 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm26329-201ENSMUST00000093723 110 ntBASIC1.2□□□□□ -2.22
Col4a4Q9QZR9 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm24338-201ENSMUST00000104205 127 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm13967-201ENSMUST00000120404 380 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm24501-201ENSMUST00000158452 62 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm24005-201ENSMUST00000158459 296 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm23196-201ENSMUST00000158806 107 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm22308-201ENSMUST00000177609 107 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm9830-201ENSMUST00000178509 357 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Mir7667-201ENSMUST00000183866 63 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm27521-201ENSMUST00000184022 64 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm29512-201ENSMUST00000185544 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28110-201ENSMUST00000185782 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm29057-201ENSMUST00000186468 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm29661-201ENSMUST00000186781 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28737-201ENSMUST00000186808 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm29118-201ENSMUST00000186908 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28433-201ENSMUST00000187085 315 ntBASIC1.19□□□□□ -2.22
Col4a4Q9QZR9 Gm28759-201ENSMUST00000187621 315 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 152.8 ms