Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.73□□□□□ -1.97
Brf1Q8CFK2 Snord82-201ENSMUST00000082889 70 ntBASIC2.73□□□□□ -1.97
Brf1Q8CFK2 Gm25199-201ENSMUST00000083095 104 ntBASIC2.73□□□□□ -1.97
Brf1Q8CFK2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.73□□□□□ -1.97
Brf1Q8CFK2 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Brf1Q8CFK2 Gm24132-201ENSMUST00000104745 91 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Gm24598-201ENSMUST00000122510 74 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Mir6353-201ENSMUST00000183596 113 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Gm27465-201ENSMUST00000184290 91 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Gm44182-201ENSMUST00000204052 115 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.72□□□□□ -1.97
Brf1Q8CFK2 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Gm18617-201ENSMUST00000222311 259 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Gm24661-201ENSMUST00000083205 104 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Mir384-201ENSMUST00000083565 88 ntBASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Brf1Q8CFK2 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Mir374b-201ENSMUST00000102314 95 ntBASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Gm26015-201ENSMUST00000104402 125 ntBASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Gm23584-201ENSMUST00000157655 129 ntBASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Gm22767-201ENSMUST00000158365 165 ntBASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Gm16561-201ENSMUST00000163001 192 ntBASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.71□□□□□ -1.98
Brf1Q8CFK2 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm13797-201ENSMUST00000121792 120 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm11471-201ENSMUST00000121824 198 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm16355-201ENSMUST00000128606 231 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm22221-201ENSMUST00000157362 103 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm22947-201ENSMUST00000158559 91 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm23571-201ENSMUST00000180073 127 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm44256-201ENSMUST00000203304 335 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Mir146-201ENSMUST00000083667 65 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.7□□□□□ -1.98
Brf1Q8CFK2 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Brf1Q8CFK2 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm22483-201ENSMUST00000157986 274 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm25711-201ENSMUST00000158633 128 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm23190-201ENSMUST00000180307 64 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm43427-201ENSMUST00000198188 331 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm20734-201ENSMUST00000216939 193 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm25204-201ENSMUST00000082843 106 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm26204-201ENSMUST00000082906 107 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm24615-201ENSMUST00000083268 113 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.69□□□□□ -1.98
Brf1Q8CFK2 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Mir466p-201ENSMUST00000103925 89 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm23015-201ENSMUST00000104145 128 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm26405-201ENSMUST00000158495 100 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm25051-201ENSMUST00000158602 249 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm19118-201ENSMUST00000222554 98 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm25634-201ENSMUST00000082667 105 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm22421-201ENSMUST00000083058 107 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm24453-201ENSMUST00000083346 76 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.68□□□□□ -1.98
Brf1Q8CFK2 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Gm23324-201ENSMUST00000157421 131 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Mir1951-201ENSMUST00000157981 89 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Gm26022-201ENSMUST00000158663 108 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Gm24304-201ENSMUST00000177635 107 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Gm26435-201ENSMUST00000179026 107 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Gm27399-201ENSMUST00000184250 78 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Mir3069-201ENSMUST00000198802 65 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Snord7-201ENSMUST00000083781 97 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Gm26175-201ENSMUST00000083794 131 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Brf1Q8CFK2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.67□□□□□ -1.98
Brf1Q8CFK2 Gm12449-201ENSMUST00000117572 234 ntBASIC2.66□□□□□ -1.98
Brf1Q8CFK2 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.66□□□□□ -1.98
Brf1Q8CFK2 Gm25223-201ENSMUST00000158200 110 ntBASIC2.66□□□□□ -1.98
Brf1Q8CFK2 Gm33866-201ENSMUST00000196911 289 ntBASIC2.66□□□□□ -1.98
Brf1Q8CFK2 Gm45456-201ENSMUST00000210841 243 ntBASIC2.66□□□□□ -1.98
Brf1Q8CFK2 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Brf1Q8CFK2 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Brf1Q8CFK2 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Brf1Q8CFK2 Gm25945-201ENSMUST00000122484 135 ntBASIC2.65□□□□□ -1.99
Brf1Q8CFK2 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.65□□□□□ -1.99
Brf1Q8CFK2 Gm25494-201ENSMUST00000158143 100 ntBASIC2.65□□□□□ -1.99
Brf1Q8CFK2 Gm23182-201ENSMUST00000158688 135 ntBASIC2.65□□□□□ -1.99
Brf1Q8CFK2 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.65□□□□□ -1.99
Brf1Q8CFK2 Gm37997-201ENSMUST00000193515 267 ntBASIC2.65□□□□□ -1.99
Brf1Q8CFK2 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.65□□□□□ -1.99
Brf1Q8CFK2 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Brf1Q8CFK2 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.65□□□□□ -1.99
Brf1Q8CFK2 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 159.7 ms