Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm22612-201ENSMUST00000158293 101 ntBASIC3.15□□□□□ -1.91
Ubp1Q811S7 Gm27934-201ENSMUST00000158795 63 ntBASIC3.15□□□□□ -1.91
Ubp1Q811S7 Gm27991-201ENSMUST00000184804 137 ntBASIC3.15□□□□□ -1.91
Ubp1Q811S7 Mir6376-201ENSMUST00000185149 131 ntBASIC3.15□□□□□ -1.91
Ubp1Q811S7 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ubp1Q811S7 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.15□□□□□ -1.91
Ubp1Q811S7 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.15□□□□□ -1.91
Ubp1Q811S7 Gm23738-201ENSMUST00000082828 171 ntBASIC3.15□□□□□ -1.91
Ubp1Q811S7 AC124456.1-201ENSMUST00000217391 2597 ntBASIC3.15□□□□□ -1.91
Ubp1Q811S7 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Ubp1Q811S7 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ubp1Q811S7 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ubp1Q811S7 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ubp1Q811S7 Gm24118-201ENSMUST00000103972 126 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Gm24127-201ENSMUST00000104110 130 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Gm26049-201ENSMUST00000157313 108 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Gm23260-201ENSMUST00000158317 172 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Gm24837-201ENSMUST00000158683 81 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Gm27672-201ENSMUST00000183751 204 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 AC098718.1-201ENSMUST00000226166 175 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ubp1Q811S7 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.14□□□□□ -1.91
Ubp1Q811S7 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ubp1Q811S7 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ubp1Q811S7 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ubp1Q811S7 Gm23716-201ENSMUST00000157348 144 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 Gm22966-201ENSMUST00000157957 129 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ubp1Q811S7 Gm37104-201ENSMUST00000193278 196 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 Gm43381-201ENSMUST00000198553 165 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 Gm22738-201ENSMUST00000083440 147 ntBASIC3.13□□□□□ -1.91
Ubp1Q811S7 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ubp1Q811S7 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Ubp1Q811S7 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ubp1Q811S7 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ubp1Q811S7 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ubp1Q811S7 Gm14626-201ENSMUST00000117619 216 ntBASIC3.12□□□□□ -1.91
Ubp1Q811S7 n-R5s15-201ENSMUST00000122635 111 ntBASIC3.12□□□□□ -1.91
Ubp1Q811S7 Gm25476-201ENSMUST00000175125 185 ntBASIC3.12□□□□□ -1.91
Ubp1Q811S7 Gm23090-201ENSMUST00000177331 78 ntBASIC3.12□□□□□ -1.91
Ubp1Q811S7 Gm35736-201ENSMUST00000203681 313 ntBASIC3.12□□□□□ -1.91
Ubp1Q811S7 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Ubp1Q811S7 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ubp1Q811S7 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ubp1Q811S7 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ubp1Q811S7 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm22105-201ENSMUST00000116734 116 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm27893-201ENSMUST00000184408 194 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm28002-201ENSMUST00000184832 100 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm29613-201ENSMUST00000185846 313 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm29544-201ENSMUST00000188860 313 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm28808-201ENSMUST00000190978 313 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm37085-201ENSMUST00000193780 196 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.11□□□□□ -1.91
Ubp1Q811S7 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm22979-201ENSMUST00000082609 159 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ubp1Q811S7 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ubp1Q811S7 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ubp1Q811S7 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ubp1Q811S7 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.11□□□□□ -1.91
Ubp1Q811S7 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Ubp1Q811S7 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ubp1Q811S7 Gm14567-201ENSMUST00000117155 174 ntBASIC3.1□□□□□ -1.91
Ubp1Q811S7 Gm22775-201ENSMUST00000177630 120 ntBASIC3.1□□□□□ -1.91
Ubp1Q811S7 Gm23569-201ENSMUST00000180120 120 ntBASIC3.1□□□□□ -1.91
Ubp1Q811S7 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.1□□□□□ -1.91
Ubp1Q811S7 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ubp1Q811S7 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ubp1Q811S7 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ubp1Q811S7 Gm24982-201ENSMUST00000104456 132 ntBASIC3.09□□□□□ -1.91
Ubp1Q811S7 Mir1198-201ENSMUST00000116995 121 ntBASIC3.09□□□□□ -1.91
Ubp1Q811S7 Gm29452-201ENSMUST00000187996 313 ntBASIC3.09□□□□□ -1.91
Ubp1Q811S7 Gm9251-201ENSMUST00000197202 628 ntBASIC3.09□□□□□ -1.91
Ubp1Q811S7 Gm43932-201ENSMUST00000204499 52 ntBASIC3.09□□□□□ -1.91
Ubp1Q811S7 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Ubp1Q811S7 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.09□□□□□ -1.92
Ubp1Q811S7 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Ubp1Q811S7 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubp1Q811S7 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubp1Q811S7 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubp1Q811S7 Gm22956-201ENSMUST00000122520 80 ntBASIC3.08□□□□□ -1.92
Ubp1Q811S7 Gm23791-201ENSMUST00000122553 293 ntBASIC3.08□□□□□ -1.92
Ubp1Q811S7 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.08□□□□□ -1.92
Ubp1Q811S7 Gm23044-201ENSMUST00000157891 100 ntBASIC3.08□□□□□ -1.92
Ubp1Q811S7 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.08□□□□□ -1.92
Ubp1Q811S7 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.08□□□□□ -1.92
Ubp1Q811S7 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm24890-201ENSMUST00000104389 102 ntBASIC3.07□□□□□ -1.92
Ubp1Q811S7 Gm24375-201ENSMUST00000104397 132 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 164 ms