Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm28861-201ENSMUST00000189681 315 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Gm29180-201ENSMUST00000190003 315 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Gm29575-201ENSMUST00000190597 315 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Gm29631-201ENSMUST00000191065 315 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Gm28160-201ENSMUST00000191229 315 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Gm29469-201ENSMUST00000191448 315 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Gm28408-201ENSMUST00000191557 463 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Gm37129-201ENSMUST00000195791 315 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.55□□□□□ -2.16
Trim38Q5SZ99 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Gm12143-201ENSMUST00000119666 332 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Gm23921-201ENSMUST00000175258 107 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Mir7026-201ENSMUST00000184384 67 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Mir7009-201ENSMUST00000184519 64 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Gm26379-202ENSMUST00000200225 132 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Gm44419-201ENSMUST00000203338 229 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Gm45207-201ENSMUST00000207469 145 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Gm25937-201ENSMUST00000083912 107 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.54□□□□□ -2.16
Trim38Q5SZ99 Mir759-201ENSMUST00000103254 98 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm25495-201ENSMUST00000104431 131 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm23907-201ENSMUST00000104595 189 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm23670-201ENSMUST00000157469 119 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm22085-201ENSMUST00000158344 110 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm22836-201ENSMUST00000158441 61 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm24737-201ENSMUST00000158861 100 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm7258-201ENSMUST00000179317 300 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.53□□□□□ -2.16
Trim38Q5SZ99 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm45296-201ENSMUST00000209625 205 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm11351-202ENSMUST00000225724 478 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Mir320-201ENSMUST00000083594 82 ntBASIC1.53□□□□□ -2.16
Trim38Q5SZ99 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.53□□□□□ -2.17
Trim38Q5SZ99 Gm23013-201ENSMUST00000104146 106 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 Gm25671-201ENSMUST00000178612 105 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 Gm23307-201ENSMUST00000179167 105 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 Gm25286-201ENSMUST00000179790 105 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 Gm27711-201ENSMUST00000183802 118 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 Gm28992-201ENSMUST00000190534 139 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 Gm44483-201ENSMUST00000197203 97 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 Gm43220-201ENSMUST00000199299 282 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.52□□□□□ -2.17
Trim38Q5SZ99 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm25759-201ENSMUST00000103988 129 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm15002-201ENSMUST00000118406 452 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm11834-201ENSMUST00000122257 585 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm24895-201ENSMUST00000122742 74 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm23221-201ENSMUST00000158118 93 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm29661-201ENSMUST00000186781 315 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm29308-201ENSMUST00000188863 315 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm37713-201ENSMUST00000191746 198 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm23851-201ENSMUST00000083831 103 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm26329-201ENSMUST00000093723 110 ntBASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
Trim38Q5SZ99 Gm11857-201ENSMUST00000119817 324 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm23558-201ENSMUST00000157823 80 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm23474-201ENSMUST00000158884 75 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm17113-201ENSMUST00000170118 171 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm22114-201ENSMUST00000177756 107 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm25450-201ENSMUST00000179144 107 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm29613-201ENSMUST00000185846 313 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm29544-201ENSMUST00000188860 313 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm28808-201ENSMUST00000190978 313 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm37089-201ENSMUST00000195616 129 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm43250-201ENSMUST00000196536 273 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Snord42a-201ENSMUST00000082606 65 ntBASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Trim38Q5SZ99 Gm23010-201ENSMUST00000104151 126 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm14307-201ENSMUST00000118930 291 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm14761-201ENSMUST00000121363 262 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm14297-201ENSMUST00000129110 291 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm16362-201ENSMUST00000135189 214 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm16358-201ENSMUST00000146046 210 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm23232-201ENSMUST00000157300 105 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm27540-201ENSMUST00000184950 187 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm29107-201ENSMUST00000190910 347 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm19855-201ENSMUST00000210145 249 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.49□□□□□ -2.17
Trim38Q5SZ99 Gm24818-201ENSMUST00000175093 161 ntBASIC1.48□□□□□ -2.17
Trim38Q5SZ99 Gm28288-201ENSMUST00000191019 214 ntBASIC1.48□□□□□ -2.17
Trim38Q5SZ99 Gm44473-201ENSMUST00000204039 152 ntBASIC1.48□□□□□ -2.17
Trim38Q5SZ99 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.48□□□□□ -2.17
Trim38Q5SZ99 Gm45543-201ENSMUST00000209327 88 ntBASIC1.48□□□□□ -2.17
Trim38Q5SZ99 Gm25135-201ENSMUST00000082648 143 ntBASIC1.48□□□□□ -2.17
Trim38Q5SZ99 Gm24316-201ENSMUST00000083041 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 147.9 ms