Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm27332-201ENSMUST00000184893 112 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Mir6376-201ENSMUST00000185149 131 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm37801-201ENSMUST00000194754 274 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm45313-201ENSMUST00000210584 178 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm18617-201ENSMUST00000222311 259 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm11388-201ENSMUST00000120908 159 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Mir1898-201ENSMUST00000122643 83 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm24501-201ENSMUST00000158452 62 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm25958-201ENSMUST00000175114 71 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm20613-201ENSMUST00000175828 345 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Gm20144-201ENSMUST00000203031 165 ntBASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trim58Q5NCC9 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm25315-201ENSMUST00000116823 121 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm11904-201ENSMUST00000120562 248 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm15213-201ENSMUST00000122098 216 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm27723-201ENSMUST00000157398 63 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm29167-201ENSMUST00000190024 377 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm43427-201ENSMUST00000198188 331 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm44320-201ENSMUST00000199276 86 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm43220-201ENSMUST00000199299 282 ntBASIC1.77□□□□□ -2.13
Trim58Q5NCC9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Trim58Q5NCC9 Gm13967-201ENSMUST00000120404 380 ntBASIC1.76□□□□□ -2.13
Trim58Q5NCC9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Trim58Q5NCC9 Gm25711-201ENSMUST00000158633 128 ntBASIC1.76□□□□□ -2.13
Trim58Q5NCC9 Mir1936-201ENSMUST00000158699 93 ntBASIC1.76□□□□□ -2.13
Trim58Q5NCC9 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.76□□□□□ -2.13
Trim58Q5NCC9 Gm23951-201ENSMUST00000104029 132 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 Gm14792-201ENSMUST00000119725 258 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 Gm14883-201ENSMUST00000120179 157 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 Gm23858-201ENSMUST00000158384 106 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 Gm26864-201ENSMUST00000181346 156 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 Gm42672-201ENSMUST00000197821 352 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 Gm44666-201ENSMUST00000208544 391 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 Gm26447-201ENSMUST00000082448 129 ntBASIC1.75□□□□□ -2.13
Trim58Q5NCC9 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm14882-201ENSMUST00000117216 218 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm22984-201ENSMUST00000122751 122 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm23640-201ENSMUST00000157860 104 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm26157-201ENSMUST00000158974 126 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm17052-201ENSMUST00000165496 289 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm17067-202ENSMUST00000180131 123 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm27521-201ENSMUST00000184022 64 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm28992-201ENSMUST00000190534 139 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm38019-201ENSMUST00000195133 380 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Mir3535-201ENSMUST00000197651 147 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm35736-201ENSMUST00000203681 313 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm44564-201ENSMUST00000207985 180 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm46997-201ENSMUST00000222108 217 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm23451-201ENSMUST00000083328 122 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Gm23039-201ENSMUST00000083870 161 ntBASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trim58Q5NCC9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trim58Q5NCC9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trim58Q5NCC9 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trim58Q5NCC9 Gm27793-201ENSMUST00000183405 76 ntBASIC1.73□□□□□ -2.13
Trim58Q5NCC9 Gm27722-201ENSMUST00000183908 76 ntBASIC1.73□□□□□ -2.13
Trim58Q5NCC9 Mir8090-201ENSMUST00000185078 136 ntBASIC1.73□□□□□ -2.13
Trim58Q5NCC9 Mir1291-201ENSMUST00000199842 117 ntBASIC1.73□□□□□ -2.13
Trim58Q5NCC9 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.73□□□□□ -2.13
Trim58Q5NCC9 Gm25788-201ENSMUST00000082721 131 ntBASIC1.73□□□□□ -2.13
Trim58Q5NCC9 Gm23423-201ENSMUST00000082782 106 ntBASIC1.73□□□□□ -2.13
Trim58Q5NCC9 Snora34-201ENSMUST00000083402 138 ntBASIC1.73□□□□□ -2.13
Trim58Q5NCC9 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm14919-201ENSMUST00000120839 390 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm25115-201ENSMUST00000157187 140 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm24847-201ENSMUST00000158032 108 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm27878-201ENSMUST00000184000 106 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Mir7225-201ENSMUST00000184178 54 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm27540-201ENSMUST00000184950 187 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm28453-203ENSMUST00000187041 189 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm5899-201ENSMUST00000071770 270 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm22294-201ENSMUST00000083308 104 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Mir107-201ENSMUST00000083660 87 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm24163-201ENSMUST00000093660 132 ntBASIC1.72□□□□□ -2.13
Trim58Q5NCC9 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.71□□□□□ -2.13
Trim58Q5NCC9 Gm23122-201ENSMUST00000157645 103 ntBASIC1.71□□□□□ -2.14
Trim58Q5NCC9 Gm22338-201ENSMUST00000157715 129 ntBASIC1.71□□□□□ -2.14
Trim58Q5NCC9 Gm22731-201ENSMUST00000158086 94 ntBASIC1.71□□□□□ -2.14
Trim58Q5NCC9 Gm24390-201ENSMUST00000179578 62 ntBASIC1.71□□□□□ -2.14
Trim58Q5NCC9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Trim58Q5NCC9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 186.1 ms