Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm11471-201ENSMUST00000121824 198 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm23548-201ENSMUST00000158963 106 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm27248-201ENSMUST00000184004 166 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm28849-201ENSMUST00000188127 174 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm9156-201ENSMUST00000189660 463 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm28330-201ENSMUST00000190353 171 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm29490-201ENSMUST00000190923 342 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Mir465d-201ENSMUST00000196314 58 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm45313-201ENSMUST00000210584 178 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trim40Q3UWA4 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Snord118-201ENSMUST00000082965 135 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Gm24164-201ENSMUST00000093663 104 ntBASIC1.59□□□□□ -2.15
Trim40Q3UWA4 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
Trim40Q3UWA4 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm22935-201ENSMUST00000103960 104 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm24068-201ENSMUST00000104513 132 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm11904-201ENSMUST00000120562 248 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm14919-201ENSMUST00000120839 390 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm22027-201ENSMUST00000122737 127 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm25371-201ENSMUST00000158162 101 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm20477-201ENSMUST00000174028 280 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm25035-201ENSMUST00000175414 77 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm44055-201ENSMUST00000204376 247 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm45344-201ENSMUST00000211610 341 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Gm23378-201ENSMUST00000082942 107 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trim40Q3UWA4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.58□□□□□ -2.16
Trim40Q3UWA4 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Trav20-201ENSMUST00000142754 347 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm25392-201ENSMUST00000157335 297 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm23718-201ENSMUST00000157350 307 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm24262-201ENSMUST00000157431 144 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm23391-201ENSMUST00000157579 104 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm22082-201ENSMUST00000157587 161 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm23043-201ENSMUST00000157890 109 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm22101-201ENSMUST00000157928 103 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm23854-201ENSMUST00000158378 108 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm22666-201ENSMUST00000158717 164 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm25397-201ENSMUST00000176951 92 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Mir6388-201ENSMUST00000184417 75 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm33866-201ENSMUST00000196911 289 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm26497-201ENSMUST00000083146 107 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm23679-201ENSMUST00000083161 119 ntBASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trim40Q3UWA4 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm24283-201ENSMUST00000104233 107 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm12512-201ENSMUST00000119620 217 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm11606-201ENSMUST00000120706 617 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm26479-201ENSMUST00000122620 106 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm23640-201ENSMUST00000157860 104 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm23581-201ENSMUST00000158531 63 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Mir3970-201ENSMUST00000199287 90 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm45365-201ENSMUST00000209489 256 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm10092-201ENSMUST00000077110 180 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.56□□□□□ -2.16
Trim40Q3UWA4 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Mir223-201ENSMUST00000102112 110 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Gm23982-201ENSMUST00000157141 106 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Gm24851-201ENSMUST00000158028 103 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Gm22075-201ENSMUST00000158599 192 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Gm23963-201ENSMUST00000179603 77 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Gm45907-201ENSMUST00000213023 193 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Gm24966-201ENSMUST00000082443 79 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Gm22571-201ENSMUST00000082984 70 ntBASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trim40Q3UWA4 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm23492-201ENSMUST00000116837 115 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm15861-201ENSMUST00000120979 339 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm22984-201ENSMUST00000122751 122 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm24847-201ENSMUST00000158032 108 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm25333-201ENSMUST00000158035 246 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm24277-201ENSMUST00000158661 104 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.54□□□□□ -2.16
Trim40Q3UWA4 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm24406-201ENSMUST00000083026 128 ntBASIC1.54□□□□□ -2.16
Trim40Q3UWA4 Gm26135-201ENSMUST00000101993 72 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Mir767-201ENSMUST00000103256 107 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm25875-201ENSMUST00000104323 107 ntBASIC1.53□□□□□ -2.16
Trim40Q3UWA4 Gm25376-201ENSMUST00000104340 133 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms