Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Snord35a-201ENSMUST00000083884 90 ntBASIC0.83□□□□□ -2.28
Upf3bQ3ULL6 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
Upf3bQ3ULL6 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm14269-201ENSMUST00000120455 306 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm11792-201ENSMUST00000120640 168 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm11891-201ENSMUST00000121241 619 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm20630-201ENSMUST00000177387 551 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Mir6985-201ENSMUST00000184641 61 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm38323-201ENSMUST00000192450 210 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm42533-201ENSMUST00000196247 157 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm42719-201ENSMUST00000197393 355 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm42506-201ENSMUST00000202009 150 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Gm24038-201ENSMUST00000082872 159 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Rny1-201ENSMUST00000083767 112 ntBASIC0.82□□□□□ -2.28
Upf3bQ3ULL6 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 Gm24342-201ENSMUST00000103907 104 ntBASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 Gm27974-201ENSMUST00000183415 105 ntBASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 Gm27420-201ENSMUST00000183823 79 ntBASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 Gm37918-201ENSMUST00000192071 120 ntBASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 Gm24261-201ENSMUST00000083744 104 ntBASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 Gm26108-201ENSMUST00000083973 191 ntBASIC0.81□□□□□ -2.28
Upf3bQ3ULL6 Gm22771-201ENSMUST00000104449 91 ntBASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 Gm12143-201ENSMUST00000119666 332 ntBASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 Gm37128-201ENSMUST00000192599 232 ntBASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 Gm38113-201ENSMUST00000193704 201 ntBASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.8□□□□□ -2.28
Upf3bQ3ULL6 Gm22544-201ENSMUST00000104349 127 ntBASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 Snord98-201ENSMUST00000116819 65 ntBASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 Gm20386-201ENSMUST00000174010 132 ntBASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 Gm18185-201ENSMUST00000186725 667 ntBASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 Gm23735-201ENSMUST00000082551 134 ntBASIC0.79□□□□□ -2.28
Upf3bQ3ULL6 Gm22545-201ENSMUST00000104350 132 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm11334-201ENSMUST00000121969 156 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm27926-201ENSMUST00000157180 66 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm24438-201ENSMUST00000157893 115 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm23114-201ENSMUST00000158478 117 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm24618-201ENSMUST00000177718 94 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm23953-201ENSMUST00000178214 94 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm26335-201ENSMUST00000178449 107 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm26332-201ENSMUST00000179813 94 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm22863-201ENSMUST00000180265 94 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm27313-201ENSMUST00000183500 142 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm28992-201ENSMUST00000190534 139 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm44458-201ENSMUST00000196594 143 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm42857-201ENSMUST00000200823 339 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm20144-201ENSMUST00000203031 165 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm43898-201ENSMUST00000204456 424 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm18113-201ENSMUST00000220630 303 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm24966-201ENSMUST00000082443 79 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm25801-201ENSMUST00000082638 106 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm25513-201ENSMUST00000083861 162 ntBASIC0.78□□□□□ -2.28
Upf3bQ3ULL6 Gm24579-201ENSMUST00000103964 144 ntBASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 Mir1b-201ENSMUST00000117012 122 ntBASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 Gm25884-201ENSMUST00000157782 62 ntBASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 Gm11392-201ENSMUST00000181419 710 ntBASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 Gm36953-201ENSMUST00000195295 268 ntBASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 Gm44358-201ENSMUST00000196301 98 ntBASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Upf3bQ3ULL6 Gm26500-201ENSMUST00000101867 106 ntBASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Gm17148-201ENSMUST00000164702 249 ntBASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Gm27236-201ENSMUST00000184147 442 ntBASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Gm29022-201ENSMUST00000190702 225 ntBASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Gm44325-201ENSMUST00000196757 77 ntBASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Gm44960-201ENSMUST00000207403 141 ntBASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Gm24355-201ENSMUST00000082858 122 ntBASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Mir155-201ENSMUST00000083463 65 ntBASIC0.76□□□□□ -2.29
Upf3bQ3ULL6 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.75□□□□□ -2.29
Upf3bQ3ULL6 Mir3109-201ENSMUST00000175301 88 ntBASIC0.75□□□□□ -2.29
Upf3bQ3ULL6 Gm26430-201ENSMUST00000178054 107 ntBASIC0.75□□□□□ -2.29
Upf3bQ3ULL6 Gm17067-202ENSMUST00000180131 123 ntBASIC0.75□□□□□ -2.29
Upf3bQ3ULL6 Gm27919-201ENSMUST00000185163 107 ntBASIC0.75□□□□□ -2.29
Upf3bQ3ULL6 Gm43250-201ENSMUST00000196536 273 ntBASIC0.75□□□□□ -2.29
Upf3bQ3ULL6 Gm44326-201ENSMUST00000198226 101 ntBASIC0.75□□□□□ -2.29
Upf3bQ3ULL6 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Upf3bQ3ULL6 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 Gm11572-201ENSMUST00000119164 120 ntBASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 Gm26914-201ENSMUST00000182262 223 ntBASIC0.74□□□□□ -2.29
Upf3bQ3ULL6 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms