Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm14758-201ENSMUST00000119104 138 ntBASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Gm23469-201ENSMUST00000157131 104 ntBASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Gm24480-201ENSMUST00000157442 103 ntBASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Gm25368-201ENSMUST00000158847 131 ntBASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Gm43993-201ENSMUST00000203972 247 ntBASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Gm18991-201ENSMUST00000209225 746 ntBASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Gm24457-201ENSMUST00000083196 105 ntBASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Ssbp4Q3U4B1 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm11786-201ENSMUST00000120799 155 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm24010-201ENSMUST00000157731 282 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm23545-201ENSMUST00000158205 104 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm25654-201ENSMUST00000158467 88 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm25253-201ENSMUST00000179958 107 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm29604-201ENSMUST00000187176 163 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm37377-201ENSMUST00000191733 304 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm32175-201ENSMUST00000193641 346 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm42834-201ENSMUST00000196845 256 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 AC124104.1-201ENSMUST00000226279 417 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Mir222-201ENSMUST00000083537 79 ntBASIC1.84□□□□□ -2.11
Ssbp4Q3U4B1 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.84□□□□□ -2.12
Ssbp4Q3U4B1 Gm23492-201ENSMUST00000116837 115 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm13433-201ENSMUST00000121701 240 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm16355-201ENSMUST00000128606 231 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Trav20-201ENSMUST00000142754 347 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm25390-201ENSMUST00000157341 103 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm23535-201ENSMUST00000157542 106 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm22097-201ENSMUST00000157929 278 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm22947-201ENSMUST00000158559 91 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm16326-201ENSMUST00000162843 414 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm27793-201ENSMUST00000183405 76 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm29014-201ENSMUST00000191422 326 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Gm25820-202ENSMUST00000197479 128 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Mir7232-201ENSMUST00000197929 74 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Mir322-201ENSMUST00000083484 95 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 Mir30d-201ENSMUST00000083503 82 ntBASIC1.83□□□□□ -2.12
Ssbp4Q3U4B1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm13885-201ENSMUST00000117569 187 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm26026-201ENSMUST00000122726 123 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm25961-201ENSMUST00000157174 135 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Mir1936-201ENSMUST00000158699 93 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm22011-201ENSMUST00000158790 123 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm22093-201ENSMUST00000158980 111 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm25933-201ENSMUST00000178943 108 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm3724-201ENSMUST00000197957 349 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Mir1291-201ENSMUST00000199842 117 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Gm24625-201ENSMUST00000082622 130 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Snora34-201ENSMUST00000083402 138 ntBASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Ssbp4Q3U4B1 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Mir767-201ENSMUST00000103256 107 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm11204-201ENSMUST00000122438 147 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm26280-201ENSMUST00000157096 101 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm23466-201ENSMUST00000157133 106 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm22281-201ENSMUST00000157198 103 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm23536-201ENSMUST00000157541 134 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm23381-201ENSMUST00000157676 94 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm25888-201ENSMUST00000157778 302 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm24237-201ENSMUST00000157790 132 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm23642-201ENSMUST00000157858 258 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm23548-201ENSMUST00000158963 106 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm20613-201ENSMUST00000175828 345 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Mir7226-201ENSMUST00000184953 60 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm37918-201ENSMUST00000192071 120 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm25796-201ENSMUST00000082645 163 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm24661-201ENSMUST00000083205 104 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm22169-201ENSMUST00000083229 107 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm23246-201ENSMUST00000083371 67 ntBASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ssbp4Q3U4B1 Gm24098-201ENSMUST00000102075 109 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm25381-201ENSMUST00000102078 109 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm22193-201ENSMUST00000116868 76 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm12143-201ENSMUST00000119666 332 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm24896-201ENSMUST00000122741 135 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm23760-201ENSMUST00000158350 116 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Gm24053-201ENSMUST00000158620 105 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Mir28b-201ENSMUST00000175399 80 ntBASIC1.8□□□□□ -2.12
Ssbp4Q3U4B1 Mir6997-201ENSMUST00000184313 71 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 197.1 ms