Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 Gm15214-201ENSMUST00000122155 470 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 Gm26150-201ENSMUST00000157426 151 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 Gm22164-201ENSMUST00000158413 106 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Cacna1bO55017 Gm25121-201ENSMUST00000179846 79 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 Gm26200-201ENSMUST00000180273 79 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.47□□□□□ -2.33
Cacna1bO55017 Gm44828-201ENSMUST00000203745 106 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 Gm46997-201ENSMUST00000222108 217 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.47□□□□□ -2.33
Cacna1bO55017 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Cacna1bO55017 Mir582-201ENSMUST00000103758 81 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm23535-201ENSMUST00000157542 106 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm24777-201ENSMUST00000157644 107 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm26038-201ENSMUST00000158151 106 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm22425-201ENSMUST00000158532 138 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm27943-201ENSMUST00000184844 116 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm17906-201ENSMUST00000202480 901 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm45658-201ENSMUST00000209197 580 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm2628-201ENSMUST00000218019 426 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Cacna1bO55017 Mir340-201ENSMUST00000083483 98 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Mir463-201ENSMUST00000093570 75 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
Cacna1bO55017 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm23836-201ENSMUST00000104434 129 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm24510-201ENSMUST00000174965 94 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm18417-201ENSMUST00000176564 648 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm29352-201ENSMUST00000188054 544 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm28438-201ENSMUST00000188299 345 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm44491-201ENSMUST00000196794 96 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm18113-201ENSMUST00000220630 303 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm25475-201ENSMUST00000082825 180 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm24536-201ENSMUST00000083144 107 ntBASIC0.46□□□□□ -2.34
Cacna1bO55017 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Cacna1bO55017 Gm24172-201ENSMUST00000104127 117 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 Gm23390-201ENSMUST00000157393 106 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 Gm25914-201ENSMUST00000157618 153 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 Gm27420-201ENSMUST00000183823 79 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 Gm28344-201ENSMUST00000185704 279 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC0.45□□□□□ -2.34
Cacna1bO55017 Gm28848-201ENSMUST00000189984 168 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 Gm45315-201ENSMUST00000209283 333 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.45□□□□□ -2.34
Cacna1bO55017 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.45□□□□□ -2.34
Cacna1bO55017 Gm24726-201ENSMUST00000158232 121 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm23352-201ENSMUST00000158428 64 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm26213-201ENSMUST00000158582 110 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.44□□□□□ -2.34
Cacna1bO55017 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm37693-201ENSMUST00000194562 234 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm44337-201ENSMUST00000196553 114 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm43602-201ENSMUST00000196772 300 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm44449-201ENSMUST00000203610 153 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm10264-201ENSMUST00000220589 429 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Snord35a-201ENSMUST00000083884 90 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm16186-201ENSMUST00000120132 216 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm21815-201ENSMUST00000178213 664 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm37399-201ENSMUST00000195224 416 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm26265-202ENSMUST00000196326 133 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm43199-201ENSMUST00000200019 307 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm44142-201ENSMUST00000203358 311 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm18854-201ENSMUST00000211196 329 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm5010-201ENSMUST00000213131 260 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Cacna1bO55017 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Cacna1bO55017 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.44□□□□□ -2.34
Cacna1bO55017 Gm26384-201ENSMUST00000102183 110 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm14884-201ENSMUST00000120456 196 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm25805-201ENSMUST00000122788 108 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm22279-201ENSMUST00000157200 93 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm24903-201ENSMUST00000158131 126 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm27510-201ENSMUST00000158214 64 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm28995-201ENSMUST00000186625 261 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm19901-201ENSMUST00000192191 495 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm38323-201ENSMUST00000192450 210 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm43556-201ENSMUST00000196186 681 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm22281-201ENSMUST00000157198 103 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm22654-201ENSMUST00000157874 105 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm24962-201ENSMUST00000157917 109 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm26501-201ENSMUST00000178307 107 ntBASIC0.43□□□□□ -2.34
Cacna1bO55017 Gm26968-201ENSMUST00000182894 481 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms