Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm25012-201ENSMUST00000158396 164 ntBASIC2.58□□□□□ -2
Hps1O08983 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.58□□□□□ -2
Hps1O08983 Mir21b-201ENSMUST00000184317 108 ntBASIC2.58□□□□□ -2
Hps1O08983 Gm34139-201ENSMUST00000196166 294 ntBASIC2.58□□□□□ -2
Hps1O08983 Gm44024-201ENSMUST00000203008 476 ntBASIC2.58□□□□□ -2
Hps1O08983 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.58□□□□□ -2
Hps1O08983 Gm10025-201ENSMUST00000079568 372 ntBASIC2.58□□□□□ -2
Hps1O08983 Gm25589-201ENSMUST00000082502 166 ntBASIC2.58□□□□□ -2
Hps1O08983 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.58□□□□□ -2
Hps1O08983 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.58□□□□□ -2
Hps1O08983 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.58□□□□□ -2
Hps1O08983 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Hps1O08983 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hps1O08983 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.57□□□□□ -2
Hps1O08983 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.57□□□□□ -2
Hps1O08983 Gm22678-201ENSMUST00000116974 101 ntBASIC2.57□□□□□ -2
Hps1O08983 Gm12513-201ENSMUST00000118617 352 ntBASIC2.57□□□□□ -2
Hps1O08983 Gm22281-201ENSMUST00000157198 103 ntBASIC2.57□□□□□ -2
Hps1O08983 Gm22500-201ENSMUST00000158982 99 ntBASIC2.57□□□□□ -2
Hps1O08983 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Hps1O08983 Gm44470-201ENSMUST00000203913 142 ntBASIC2.57□□□□□ -2
Hps1O08983 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.57□□□□□ -2
Hps1O08983 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.57□□□□□ -2
Hps1O08983 Gm25204-201ENSMUST00000082843 106 ntBASIC2.57□□□□□ -2
Hps1O08983 Gm23847-201ENSMUST00000083829 110 ntBASIC2.57□□□□□ -2
Hps1O08983 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Hps1O08983 Gm26135-201ENSMUST00000101993 72 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm12449-201ENSMUST00000117572 234 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm25059-201ENSMUST00000157367 117 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm26291-201ENSMUST00000158889 137 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm22476-201ENSMUST00000158902 100 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm17161-201ENSMUST00000169187 524 ntBASIC2.56□□□□□ -2
Hps1O08983 Snord50b-201ENSMUST00000178497 72 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm28169-201ENSMUST00000190342 345 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm45445-201ENSMUST00000209586 232 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm45452-201ENSMUST00000210905 177 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.56□□□□□ -2
Hps1O08983 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.56□□□□□ -2
Hps1O08983 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm22782-201ENSMUST00000104082 132 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm26341-201ENSMUST00000104561 134 ntBASIC2.55□□□□□ -2
Hps1O08983 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hps1O08983 Gm23325-201ENSMUST00000157422 129 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm26022-201ENSMUST00000158663 108 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm23182-201ENSMUST00000158688 135 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hps1O08983 Gm25253-201ENSMUST00000179958 107 ntBASIC2.55□□□□□ -2
Hps1O08983 Mir8116-201ENSMUST00000184134 97 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm37693-201ENSMUST00000194562 234 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm43199-201ENSMUST00000200019 307 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm24625-201ENSMUST00000082622 130 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm23239-201ENSMUST00000083006 181 ntBASIC2.55□□□□□ -2
Hps1O08983 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.55□□□□□ -2
Hps1O08983 Mir423-201ENSMUST00000083584 109 ntBASIC2.55□□□□□ -2
Hps1O08983 Gm10813-201ENSMUST00000099936 90 ntBASIC2.55□□□□□ -2
Hps1O08983 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Hps1O08983 Gm26154-201ENSMUST00000102339 96 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm6954-201ENSMUST00000117416 225 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm13801-201ENSMUST00000120750 160 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm13862-201ENSMUST00000121220 197 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm25153-201ENSMUST00000157118 156 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm23101-201ENSMUST00000157550 137 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm26405-201ENSMUST00000158495 100 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm23409-201ENSMUST00000158516 237 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.54□□□□□ -2
Hps1O08983 Gm26337-201ENSMUST00000178000 79 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm23922-201ENSMUST00000178792 79 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm24657-201ENSMUST00000180085 79 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm22996-201ENSMUST00000180236 79 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hps1O08983 Gm37007-201ENSMUST00000194234 319 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm37037-201ENSMUST00000194475 424 ntBASIC2.54□□□□□ -2
Hps1O08983 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.54□□□□□ -2
Hps1O08983 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.54□□□□□ -2
Hps1O08983 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.54□□□□□ -2
Hps1O08983 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.53□□□□□ -2
Hps1O08983 Gm24276-201ENSMUST00000102181 110 ntBASIC2.53□□□□□ -2
Hps1O08983 Mir499-201ENSMUST00000102357 79 ntBASIC2.53□□□□□ -2
Hps1O08983 Gm23011-201ENSMUST00000104148 132 ntBASIC2.53□□□□□ -2
Hps1O08983 Gm26293-201ENSMUST00000104170 84 ntBASIC2.53□□□□□ -2
Hps1O08983 Gm22193-201ENSMUST00000116868 76 ntBASIC2.53□□□□□ -2
Hps1O08983 Gm22051-201ENSMUST00000117002 127 ntBASIC2.53□□□□□ -2
Hps1O08983 Mir1966-201ENSMUST00000158807 108 ntBASIC2.53□□□□□ -2
Hps1O08983 Mir7068-201ENSMUST00000183439 74 ntBASIC2.53□□□□□ -2
Hps1O08983 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.53□□□□□ -2
Hps1O08983 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.53□□□□□ -2
Hps1O08983 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.53□□□□□ -2
Hps1O08983 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.53□□□□□ -2
Hps1O08983 Gm25142-201ENSMUST00000082698 107 ntBASIC2.53□□□□□ -2
Hps1O08983 Gm25814-201ENSMUST00000082754 107 ntBASIC2.53□□□□□ -2
Hps1O08983 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hps1O08983 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
Hps1O08983 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hps1O08983 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Hps1O08983 Gm22148-201ENSMUST00000104445 107 ntBASIC2.52□□□□□ -2.01
Hps1O08983 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.52□□□□□ -2.01
Hps1O08983 Gm15861-201ENSMUST00000120979 339 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 145.8 ms