Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm16265-201ENSMUST00000134558 108 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm23557-201ENSMUST00000157820 138 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm3027-201ENSMUST00000167579 451 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm26968-201ENSMUST00000182894 481 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm27385-201ENSMUST00000184747 104 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm28862-201ENSMUST00000188246 163 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm44358-201ENSMUST00000196301 98 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm24625-201ENSMUST00000082622 130 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm24038-201ENSMUST00000082872 159 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm26066-201ENSMUST00000083385 109 ntBASIC0.64□□□□□ -2.31
Rpa3Q9CQ71 Gm26338-201ENSMUST00000102372 110 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Snord71-201ENSMUST00000104361 85 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm14803-201ENSMUST00000117163 361 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm14922-201ENSMUST00000121131 163 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm24401-201ENSMUST00000157868 91 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm25901-201ENSMUST00000158494 130 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm25976-201ENSMUST00000158695 130 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Snora24-201ENSMUST00000174989 130 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm29022-201ENSMUST00000190702 225 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm37713-201ENSMUST00000191746 198 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm44326-201ENSMUST00000198226 101 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Gm25578-201ENSMUST00000083406 104 ntBASIC0.63□□□□□ -2.31
Rpa3Q9CQ71 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Mir695-201ENSMUST00000102261 109 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Mir582-201ENSMUST00000103758 81 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm11792-201ENSMUST00000120640 168 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm25121-201ENSMUST00000179846 79 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm34015-201ENSMUST00000194908 451 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm42719-201ENSMUST00000197393 355 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm35558-203ENSMUST00000222264 204 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Snord32a-201ENSMUST00000083285 83 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm23731-201ENSMUST00000083749 107 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm25650-201ENSMUST00000083784 162 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.62□□□□□ -2.31
Rpa3Q9CQ71 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Gm26384-201ENSMUST00000102183 110 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Gm22935-201ENSMUST00000103960 104 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Gm24323-201ENSMUST00000175342 77 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Gm26236-201ENSMUST00000175536 137 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Gm24920-201ENSMUST00000083018 85 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Mir463-201ENSMUST00000093570 75 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.61□□□□□ -2.31
Rpa3Q9CQ71 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Rpa3Q9CQ71 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.6□□□□□ -2.31
Rpa3Q9CQ71 Gm22281-201ENSMUST00000157198 103 ntBASIC0.6□□□□□ -2.31
Rpa3Q9CQ71 Gm24747-201ENSMUST00000157835 87 ntBASIC0.6□□□□□ -2.31
Rpa3Q9CQ71 Gm27817-201ENSMUST00000184302 233 ntBASIC0.6□□□□□ -2.31
Rpa3Q9CQ71 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.6□□□□□ -2.31
Rpa3Q9CQ71 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Rpa3Q9CQ71 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm22279-201ENSMUST00000157200 93 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm25166-201ENSMUST00000158909 111 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm22802-201ENSMUST00000175621 89 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm27793-201ENSMUST00000183405 76 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm29490-201ENSMUST00000190923 342 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm44396-201ENSMUST00000199843 114 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm43898-201ENSMUST00000204456 424 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Snord68-201ENSMUST00000082516 86 ntBASIC0.59□□□□□ -2.31
Rpa3Q9CQ71 Gm22673-201ENSMUST00000104415 131 ntBASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 Mir872-201ENSMUST00000104728 81 ntBASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 Gm26914-201ENSMUST00000182262 223 ntBASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 Gm38060-201ENSMUST00000194822 464 ntBASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 Gm24311-201ENSMUST00000082570 104 ntBASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 Mir33-201ENSMUST00000083531 69 ntBASIC0.58□□□□□ -2.32
Rpa3Q9CQ71 Gm11334-201ENSMUST00000121969 156 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Gm25884-201ENSMUST00000157782 62 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Gm22565-201ENSMUST00000175540 69 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Gm27313-201ENSMUST00000183500 142 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Gm45658-201ENSMUST00000209197 580 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Gm22302-201ENSMUST00000082657 106 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Mir216a-201ENSMUST00000083605 72 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Gm25007-201ENSMUST00000083808 133 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Mir362-201ENSMUST00000093592 65 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.57□□□□□ -2.32
Rpa3Q9CQ71 Gm24271-201ENSMUST00000102327 111 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 159.8 ms