Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.22□□□□□ -1.89
Ubp1Q811S7 Gm9765-201ENSMUST00000043170 321 ntBASIC3.22□□□□□ -1.89
Ubp1Q811S7 Gm24536-201ENSMUST00000083144 107 ntBASIC3.22□□□□□ -1.89
Ubp1Q811S7 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.21□□□□□ -1.89
Ubp1Q811S7 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ubp1Q811S7 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ubp1Q811S7 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ubp1Q811S7 Gm24232-201ENSMUST00000104314 132 ntBASIC3.21□□□□□ -1.9
Ubp1Q811S7 Mir293-201ENSMUST00000104841 80 ntBASIC3.21□□□□□ -1.9
Ubp1Q811S7 Gm22722-201ENSMUST00000157467 132 ntBASIC3.21□□□□□ -1.9
Ubp1Q811S7 Gm22833-201ENSMUST00000158292 132 ntBASIC3.21□□□□□ -1.9
Ubp1Q811S7 Rnu7-201ENSMUST00000158458 62 ntBASIC3.21□□□□□ -1.9
Ubp1Q811S7 Gm27648-201ENSMUST00000184315 107 ntBASIC3.21□□□□□ -1.9
Ubp1Q811S7 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.21□□□□□ -1.9
Ubp1Q811S7 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.21□□□□□ -1.9
Ubp1Q811S7 Gm25812-201ENSMUST00000082751 103 ntBASIC3.21□□□□□ -1.9
Ubp1Q811S7 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ubp1Q811S7 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ubp1Q811S7 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.21□□□□□ -1.9
Ubp1Q811S7 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ubp1Q811S7 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ubp1Q811S7 Mir669b-201ENSMUST00000102172 97 ntBASIC3.2□□□□□ -1.9
Ubp1Q811S7 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ubp1Q811S7 Gm25323-201ENSMUST00000122555 103 ntBASIC3.2□□□□□ -1.9
Ubp1Q811S7 Gm23168-201ENSMUST00000157156 143 ntBASIC3.2□□□□□ -1.9
Ubp1Q811S7 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.2□□□□□ -1.9
Ubp1Q811S7 Gm37081-201ENSMUST00000192034 196 ntBASIC3.2□□□□□ -1.9
Ubp1Q811S7 Mir3961-201ENSMUST00000198795 59 ntBASIC3.2□□□□□ -1.9
Ubp1Q811S7 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.2□□□□□ -1.9
Ubp1Q811S7 Snord118-201ENSMUST00000082965 135 ntBASIC3.2□□□□□ -1.9
Ubp1Q811S7 Mir155-201ENSMUST00000083463 65 ntBASIC3.2□□□□□ -1.9
Ubp1Q811S7 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ubp1Q811S7 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ubp1Q811S7 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ubp1Q811S7 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Ubp1Q811S7 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ubp1Q811S7 Gm25526-201ENSMUST00000104332 132 ntBASIC3.19□□□□□ -1.9
Ubp1Q811S7 Gm26100-201ENSMUST00000157245 127 ntBASIC3.19□□□□□ -1.9
Ubp1Q811S7 Gm23080-201ENSMUST00000157846 103 ntBASIC3.19□□□□□ -1.9
Ubp1Q811S7 Mir6914-201ENSMUST00000184999 69 ntBASIC3.19□□□□□ -1.9
Ubp1Q811S7 Mir7215-201ENSMUST00000200383 51 ntBASIC3.19□□□□□ -1.9
Ubp1Q811S7 Gm36776-201ENSMUST00000207006 203 ntBASIC3.19□□□□□ -1.9
Ubp1Q811S7 Mir193a-201ENSMUST00000083461 66 ntBASIC3.19□□□□□ -1.9
Ubp1Q811S7 Gm42635-201ENSMUST00000200266 2571 ntBASIC3.19□□□□□ -1.9
Ubp1Q811S7 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ubp1Q811S7 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ubp1Q811S7 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ubp1Q811S7 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ubp1Q811S7 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ubp1Q811S7 Gm26423-201ENSMUST00000104277 128 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 Snord90-201ENSMUST00000104568 111 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 Gm11253-201ENSMUST00000118486 201 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 Gm24632-201ENSMUST00000122770 323 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 Gm22349-201ENSMUST00000157864 107 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 Gm26005-201ENSMUST00000158802 134 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 Gm27878-201ENSMUST00000184000 106 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.18□□□□□ -1.9
Ubp1Q811S7 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ubp1Q811S7 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ubp1Q811S7 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.18□□□□□ -1.9
Ubp1Q811S7 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ubp1Q811S7 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ubp1Q811S7 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Snord100-201ENSMUST00000116836 74 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm12723-201ENSMUST00000120700 451 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm24141-201ENSMUST00000122776 115 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm2830-201ENSMUST00000140330 385 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm22731-201ENSMUST00000158086 94 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm23380-201ENSMUST00000158448 103 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.17□□□□□ -1.9
Ubp1Q811S7 Mir3106-201ENSMUST00000175401 82 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm9156-201ENSMUST00000189660 463 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.17□□□□□ -1.9
Ubp1Q811S7 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm25136-201ENSMUST00000083253 115 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm23136-201ENSMUST00000083425 99 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm22739-201ENSMUST00000083437 160 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Gm23947-201ENSMUST00000093636 107 ntBASIC3.17□□□□□ -1.9
Ubp1Q811S7 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ubp1Q811S7 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm22115-201ENSMUST00000103976 133 ntBASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm23923-201ENSMUST00000104108 133 ntBASIC3.16□□□□□ -1.9
Ubp1Q811S7 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm23865-201ENSMUST00000157723 97 ntBASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm25371-201ENSMUST00000158162 101 ntBASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm27374-201ENSMUST00000183660 81 ntBASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm10172-201ENSMUST00000085929 558 ntBASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.16□□□□□ -1.9
Ubp1Q811S7 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ubp1Q811S7 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.15□□□□□ -1.9
Ubp1Q811S7 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ubp1Q811S7 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.15□□□□□ -1.9
Ubp1Q811S7 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Ubp1Q811S7 Gm15733-201ENSMUST00000132957 242 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 187.1 ms