Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm23536-201ENSMUST00000157541 134 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Gm23548-201ENSMUST00000158963 106 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Gm20613-201ENSMUST00000175828 345 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Mir6406-201ENSMUST00000183592 120 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Gm37918-201ENSMUST00000192071 120 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Gm22169-201ENSMUST00000083229 107 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.78□□□□□ -1.96
Ddx55Q6ZPL9 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Ddx55Q6ZPL9 Mir767-201ENSMUST00000103256 107 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm24896-201ENSMUST00000122741 135 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm23466-201ENSMUST00000157133 106 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm22281-201ENSMUST00000157198 103 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm23230-201ENSMUST00000157298 133 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm29658-201ENSMUST00000185404 230 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm43587-201ENSMUST00000199590 204 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm9174-201ENSMUST00000078149 255 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Gm26126-201ENSMUST00000083188 164 ntBASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ddx55Q6ZPL9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm25094-201ENSMUST00000103992 131 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm23950-201ENSMUST00000104026 129 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm12941-201ENSMUST00000117934 220 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm12143-201ENSMUST00000119666 332 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm13862-201ENSMUST00000121220 197 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm23600-201ENSMUST00000157260 71 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm24053-201ENSMUST00000158620 105 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Mir3569-201ENSMUST00000185080 58 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm29553-201ENSMUST00000189692 279 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm44352-201ENSMUST00000196358 110 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm43676-201ENSMUST00000197532 540 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx55Q6ZPL9 Gm25377-201ENSMUST00000104334 129 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Snord72-201ENSMUST00000104549 81 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Gm16355-201ENSMUST00000128606 231 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Gm26279-201ENSMUST00000157095 102 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Gm22517-201ENSMUST00000158265 136 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Gm23005-201ENSMUST00000158950 136 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Mir6997-201ENSMUST00000184313 71 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Mir7026-201ENSMUST00000184384 67 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Gm43991-201ENSMUST00000203751 274 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
Ddx55Q6ZPL9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm25783-201ENSMUST00000122525 190 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm24440-201ENSMUST00000157236 63 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm24512-201ENSMUST00000174963 65 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm24573-201ENSMUST00000175499 112 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm27476-201ENSMUST00000183366 104 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm28992-201ENSMUST00000190534 139 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm44478-201ENSMUST00000204875 114 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm44563-201ENSMUST00000207958 178 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm44666-201ENSMUST00000208544 391 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ddx55Q6ZPL9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm24283-201ENSMUST00000104233 107 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm26105-201ENSMUST00000157253 190 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm22803-201ENSMUST00000158049 283 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Snord11-201ENSMUST00000158468 84 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm26024-201ENSMUST00000158657 322 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm25488-201ENSMUST00000158728 118 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm27330-201ENSMUST00000184689 132 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm43512-201ENSMUST00000198495 176 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm22744-201ENSMUST00000083444 65 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ddx55Q6ZPL9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm25526-201ENSMUST00000104332 132 ntBASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm22486-201ENSMUST00000116815 137 ntBASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm12512-201ENSMUST00000119620 217 ntBASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Mir1967-201ENSMUST00000157789 82 ntBASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm25015-201ENSMUST00000158400 128 ntBASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm25834-201ENSMUST00000158916 101 ntBASIC2.72□□□□□ -1.97
Ddx55Q6ZPL9 Gm17052-201ENSMUST00000165496 289 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 331.2 ms