Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm45522-201ENSMUST00000210784 166 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm24625-201ENSMUST00000082622 130 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm25796-201ENSMUST00000082645 163 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm26495-201ENSMUST00000083152 137 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Mir344e-201ENSMUST00000104677 66 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm23841-201ENSMUST00000116951 114 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm26105-201ENSMUST00000157253 190 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm23892-201ENSMUST00000158105 130 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm24006-201ENSMUST00000158462 132 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm22433-201ENSMUST00000158550 142 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm27421-201ENSMUST00000184729 167 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm42672-201ENSMUST00000197821 352 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Mir7232-201ENSMUST00000197929 74 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
Usp49Q6P9L4 Gm12797-201ENSMUST00000118645 273 ntBASIC2.46□□□□□ -2.02
Usp49Q6P9L4 Gm12417-201ENSMUST00000119153 403 ntBASIC2.46□□□□□ -2.02
Usp49Q6P9L4 Gm24896-201ENSMUST00000122741 135 ntBASIC2.46□□□□□ -2.02
Usp49Q6P9L4 Gm25115-201ENSMUST00000157187 140 ntBASIC2.46□□□□□ -2.02
Usp49Q6P9L4 Gm25615-201ENSMUST00000177836 94 ntBASIC2.46□□□□□ -2.02
Usp49Q6P9L4 Gm45150-201ENSMUST00000206051 467 ntBASIC2.46□□□□□ -2.02
Usp49Q6P9L4 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.46□□□□□ -2.02
Usp49Q6P9L4 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Usp49Q6P9L4 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm22193-201ENSMUST00000116868 76 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm23048-201ENSMUST00000157237 129 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Mir1936-201ENSMUST00000158699 93 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Mir28b-201ENSMUST00000175399 80 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm27753-201ENSMUST00000184742 203 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Mir3569-201ENSMUST00000185080 58 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm28627-201ENSMUST00000186141 453 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm37377-201ENSMUST00000191733 304 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm37746-201ENSMUST00000193249 198 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm42834-201ENSMUST00000196845 256 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Mir1291-201ENSMUST00000199842 117 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm44533-201ENSMUST00000207782 268 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm23377-201ENSMUST00000082943 126 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm24204-201ENSMUST00000082950 107 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Gm26126-201ENSMUST00000083188 164 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Snord104-201ENSMUST00000083192 70 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Snora34-201ENSMUST00000083402 138 ntBASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Usp49Q6P9L4 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Mir541-201ENSMUST00000102097 90 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm24640-201ENSMUST00000116949 126 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm22626-201ENSMUST00000116990 126 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm13588-201ENSMUST00000120026 135 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm12771-201ENSMUST00000120246 135 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm24594-201ENSMUST00000122502 99 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm23230-201ENSMUST00000157298 133 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm23535-201ENSMUST00000157542 106 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Mir1927-201ENSMUST00000158579 109 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm23002-201ENSMUST00000179221 107 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm24761-201ENSMUST00000179589 127 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm24488-201ENSMUST00000179934 127 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm25701-201ENSMUST00000179988 127 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm26431-201ENSMUST00000180199 127 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm32175-201ENSMUST00000193641 346 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm43676-201ENSMUST00000197532 540 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm45907-201ENSMUST00000213023 193 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Mir322-201ENSMUST00000083484 95 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Snora69-201ENSMUST00000083708 131 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm23039-201ENSMUST00000083870 161 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.44□□□□□ -2.02
Usp49Q6P9L4 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Usp49Q6P9L4 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm23492-201ENSMUST00000116837 115 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm12143-201ENSMUST00000119666 332 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm12721-201ENSMUST00000120621 268 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm16355-201ENSMUST00000128606 231 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm16510-201ENSMUST00000153501 249 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm23545-201ENSMUST00000158205 104 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm22517-201ENSMUST00000158265 136 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm26024-201ENSMUST00000158657 322 ntBASIC2.43□□□□□ -2.02
Usp49Q6P9L4 Gm23005-201ENSMUST00000158950 136 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 130.7 ms