Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm25078-201ENSMUST00000082530 107 ntBASIC1.88□□□□□ -2.11
Ctr9Q62018 Gm25788-201ENSMUST00000082721 131 ntBASIC1.88□□□□□ -2.11
Ctr9Q62018 Gm24977-201ENSMUST00000083106 163 ntBASIC1.88□□□□□ -2.11
Ctr9Q62018 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ctr9Q62018 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.87□□□□□ -2.11
Ctr9Q62018 Gm24630-201ENSMUST00000122768 106 ntBASIC1.87□□□□□ -2.11
Ctr9Q62018 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Ctr9Q62018 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ctr9Q62018 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.87□□□□□ -2.11
Ctr9Q62018 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.87□□□□□ -2.11
Ctr9Q62018 Mir107-201ENSMUST00000083660 87 ntBASIC1.87□□□□□ -2.11
Ctr9Q62018 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ctr9Q62018 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ctr9Q62018 Gm24629-201ENSMUST00000122762 89 ntBASIC1.86□□□□□ -2.11
Ctr9Q62018 Gm24076-201ENSMUST00000158179 94 ntBASIC1.86□□□□□ -2.11
Ctr9Q62018 Mir5624-201ENSMUST00000176635 61 ntBASIC1.86□□□□□ -2.11
Ctr9Q62018 Gm25450-201ENSMUST00000179144 107 ntBASIC1.86□□□□□ -2.11
Ctr9Q62018 Gm43406-201ENSMUST00000200356 334 ntBASIC1.86□□□□□ -2.11
Ctr9Q62018 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ctr9Q62018 Gm22972-201ENSMUST00000083297 131 ntBASIC1.86□□□□□ -2.11
Ctr9Q62018 Gm26107-201ENSMUST00000083972 107 ntBASIC1.86□□□□□ -2.11
Ctr9Q62018 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm25992-201ENSMUST00000102437 109 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm23983-201ENSMUST00000157142 114 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm22338-201ENSMUST00000157715 129 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm22731-201ENSMUST00000158086 94 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm23759-201ENSMUST00000158351 268 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm23474-201ENSMUST00000158884 75 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm24174-201ENSMUST00000158933 111 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm17067-202ENSMUST00000180131 123 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Mir6351-201ENSMUST00000183826 99 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29512-201ENSMUST00000185544 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28110-201ENSMUST00000185782 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29057-201ENSMUST00000186468 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29661-201ENSMUST00000186781 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28737-201ENSMUST00000186808 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29147-201ENSMUST00000186846 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29118-201ENSMUST00000186908 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28433-201ENSMUST00000187085 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29227-201ENSMUST00000187139 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28759-201ENSMUST00000187621 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28831-201ENSMUST00000187739 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28200-201ENSMUST00000187778 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29034-201ENSMUST00000188099 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28752-201ENSMUST00000188340 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29378-201ENSMUST00000188723 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28569-201ENSMUST00000188748 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28120-201ENSMUST00000188812 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28369-201ENSMUST00000188993 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29037-201ENSMUST00000189092 313 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28909-201ENSMUST00000189406 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28861-201ENSMUST00000189681 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29180-201ENSMUST00000190003 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29575-201ENSMUST00000190597 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm28160-201ENSMUST00000191229 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm29469-201ENSMUST00000191448 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm37129-201ENSMUST00000195791 315 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Mir376a-201ENSMUST00000197584 68 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Mir3087-201ENSMUST00000199405 56 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm20144-201ENSMUST00000203031 165 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm44655-201ENSMUST00000207768 423 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm45616-201ENSMUST00000211711 319 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.85□□□□□ -2.11
Ctr9Q62018 Gm11862-201ENSMUST00000119678 659 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ctr9Q62018 Mir1936-201ENSMUST00000158699 93 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Gm29665-201ENSMUST00000191457 528 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Gm44373-201ENSMUST00000196112 169 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Gm5899-201ENSMUST00000071770 270 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Gm24355-201ENSMUST00000082858 122 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Gm23845-201ENSMUST00000083834 152 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Snora33-201ENSMUST00000093556 129 ntBASIC1.84□□□□□ -2.11
Ctr9Q62018 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ctr9Q62018 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm15115-201ENSMUST00000121145 264 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm24598-201ENSMUST00000122510 74 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm23214-201ENSMUST00000122716 157 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm22814-201ENSMUST00000157452 104 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm22216-201ENSMUST00000157557 114 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm24333-201ENSMUST00000175101 84 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm22448-201ENSMUST00000179254 107 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm27793-201ENSMUST00000183405 76 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm27905-201ENSMUST00000184005 207 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm23406-201ENSMUST00000082537 122 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm25793-201ENSMUST00000083287 107 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Gm24412-201ENSMUST00000083426 109 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.83□□□□□ -2.12
Ctr9Q62018 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ctr9Q62018 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ctr9Q62018 Gm26080-201ENSMUST00000104069 131 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 159.6 ms