Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm23921-201ENSMUST00000175258 107 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm27997-201ENSMUST00000184942 69 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29512-201ENSMUST00000185544 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28110-201ENSMUST00000185782 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29057-201ENSMUST00000186468 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29661-201ENSMUST00000186781 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28737-201ENSMUST00000186808 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29118-201ENSMUST00000186908 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28433-201ENSMUST00000187085 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28759-201ENSMUST00000187621 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28831-201ENSMUST00000187739 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28200-201ENSMUST00000187778 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28752-201ENSMUST00000188340 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29378-201ENSMUST00000188723 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28569-201ENSMUST00000188748 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28120-201ENSMUST00000188812 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28369-201ENSMUST00000188993 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29037-201ENSMUST00000189092 313 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28909-201ENSMUST00000189406 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm28861-201ENSMUST00000189681 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29657-201ENSMUST00000189807 342 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29180-201ENSMUST00000190003 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29575-201ENSMUST00000190597 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm29469-201ENSMUST00000191448 315 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm44482-201ENSMUST00000199232 103 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm43914-201ENSMUST00000203592 594 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm44182-201ENSMUST00000204052 115 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm44055-201ENSMUST00000204376 247 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm44655-201ENSMUST00000207768 423 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm24590-201ENSMUST00000116699 119 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm14837-201ENSMUST00000119688 206 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm6829-201ENSMUST00000119858 360 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm24635-201ENSMUST00000122712 128 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm24896-201ENSMUST00000122741 135 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm8121-201ENSMUST00000153583 499 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm23718-201ENSMUST00000157350 307 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm23581-201ENSMUST00000158531 63 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm17113-201ENSMUST00000170118 171 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm25933-201ENSMUST00000178943 108 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trim58Q5NCC9 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm24152-201ENSMUST00000082764 163 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm24355-201ENSMUST00000082858 122 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm24316-201ENSMUST00000083041 107 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm23679-201ENSMUST00000083161 119 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Mir300-201ENSMUST00000083485 79 ntBASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.83□□□□□ -2.12
Trim58Q5NCC9 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm23941-201ENSMUST00000101953 107 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm23010-201ENSMUST00000104151 126 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm22193-201ENSMUST00000116868 76 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm22535-201ENSMUST00000158174 119 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm23759-201ENSMUST00000158351 268 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm26200-201ENSMUST00000180273 79 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm29818-201ENSMUST00000218070 165 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Gm11351-202ENSMUST00000225724 478 ntBASIC1.82□□□□□ -2.12
Trim58Q5NCC9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm13885-201ENSMUST00000117569 187 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm24480-201ENSMUST00000157442 103 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm25653-201ENSMUST00000158473 138 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm24799-201ENSMUST00000178431 79 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm33866-201ENSMUST00000196911 289 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm45005-201ENSMUST00000206640 157 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm16976-205ENSMUST00000227324 226 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm24356-201ENSMUST00000082859 106 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm25793-201ENSMUST00000083287 107 ntBASIC1.81□□□□□ -2.12
Trim58Q5NCC9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trim58Q5NCC9 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Gm22315-201ENSMUST00000158010 143 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Gm22537-201ENSMUST00000158172 199 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Gm24225-201ENSMUST00000158825 98 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Mir7017-201ENSMUST00000184894 62 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trim58Q5NCC9 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm13711-201ENSMUST00000119708 453 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm22215-201ENSMUST00000157558 96 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Snord11-201ENSMUST00000158468 84 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm25397-201ENSMUST00000176951 92 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm7958-201ENSMUST00000178255 468 ntBASIC1.79□□□□□ -2.12
Trim58Q5NCC9 Gm7950-201ENSMUST00000179633 468 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 204.2 ms