Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm12143-201ENSMUST00000119666 332 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Gm24858-201ENSMUST00000158058 323 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Gm17052-201ENSMUST00000165496 289 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Mir7241-201ENSMUST00000184532 64 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Gm37081-201ENSMUST00000192034 196 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Gm44384-201ENSMUST00000200208 114 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.66□□□□□ -2.14
Trim40Q3UWA4 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Gm26447-201ENSMUST00000082448 129 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Trim40Q3UWA4 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.65□□□□□ -2.14
Trim40Q3UWA4 Gm24079-201ENSMUST00000104352 132 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Gm22674-201ENSMUST00000104413 131 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Gm13967-201ENSMUST00000120404 380 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Gm23579-201ENSMUST00000158528 103 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Mir6901-201ENSMUST00000185062 62 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Gm28992-201ENSMUST00000190534 139 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Gm37763-201ENSMUST00000193445 120 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Mir7021-201ENSMUST00000197026 63 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Gm29818-201ENSMUST00000218070 165 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Gm24460-201ENSMUST00000082731 106 ntBASIC1.65□□□□□ -2.15
Trim40Q3UWA4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm15213-201ENSMUST00000122098 216 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm27723-201ENSMUST00000157398 63 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm22315-201ENSMUST00000158010 143 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm7958-201ENSMUST00000178255 468 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm22510-201ENSMUST00000179304 79 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm26336-201ENSMUST00000179449 79 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm26390-201ENSMUST00000179628 79 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm7950-201ENSMUST00000179633 468 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm20923-201ENSMUST00000190009 319 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm21088-201ENSMUST00000190875 316 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm44909-201ENSMUST00000208756 165 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm45456-201ENSMUST00000210841 243 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm10360-201ENSMUST00000097219 272 ntBASIC1.64□□□□□ -2.15
Trim40Q3UWA4 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trim40Q3UWA4 Gm26077-201ENSMUST00000104064 123 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm23551-201ENSMUST00000116852 121 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm8121-201ENSMUST00000153583 499 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm22217-201ENSMUST00000157556 313 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm22603-201ENSMUST00000157603 96 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm23181-201ENSMUST00000158685 110 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm16162-201ENSMUST00000162296 297 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Snord87-201ENSMUST00000175437 87 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm29657-201ENSMUST00000189807 342 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm42834-201ENSMUST00000196845 256 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm43035-201ENSMUST00000197626 517 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm35736-201ENSMUST00000203681 313 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gm45543-201ENSMUST00000209327 88 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.63□□□□□ -2.15
Trim40Q3UWA4 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trim40Q3UWA4 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Gm26150-201ENSMUST00000157426 151 ntBASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Gm26405-201ENSMUST00000158495 100 ntBASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Mir6351-201ENSMUST00000183826 99 ntBASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Gm26493-201ENSMUST00000083155 136 ntBASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Mir429-201ENSMUST00000083493 83 ntBASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trim40Q3UWA4 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trim40Q3UWA4 Rnu7-201ENSMUST00000158458 62 ntBASIC1.61□□□□□ -2.15
Trim40Q3UWA4 Gm28453-203ENSMUST00000187041 189 ntBASIC1.61□□□□□ -2.15
Trim40Q3UWA4 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.61□□□□□ -2.15
Trim40Q3UWA4 Gm38060-201ENSMUST00000194822 464 ntBASIC1.61□□□□□ -2.15
Trim40Q3UWA4 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.61□□□□□ -2.15
Trim40Q3UWA4 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.61□□□□□ -2.15
Trim40Q3UWA4 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Trim40Q3UWA4 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm25168-201ENSMUST00000104189 132 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm15536-201ENSMUST00000121411 114 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm24632-201ENSMUST00000122770 323 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm22883-201ENSMUST00000157376 106 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm22768-201ENSMUST00000158366 153 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm25491-201ENSMUST00000158733 308 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm24510-201ENSMUST00000174965 94 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm27521-201ENSMUST00000184022 64 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Mir7081-201ENSMUST00000184490 75 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Mir7678-201ENSMUST00000185076 71 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm44491-201ENSMUST00000196794 96 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Gm24536-201ENSMUST00000083144 107 ntBASIC1.6□□□□□ -2.15
Trim40Q3UWA4 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 140.4 ms