Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm23731-201ENSMUST00000083749 107 ntBASIC2.07□□□□□ -2.08
NcanP55066 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.07□□□□□ -2.08
NcanP55066 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.07□□□□□ -2.08
NcanP55066 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NcanP55066 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NcanP55066 Gm24374-201ENSMUST00000104394 106 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm24892-201ENSMUST00000122747 104 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm22554-201ENSMUST00000157798 147 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm23852-201ENSMUST00000158376 77 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm22675-201ENSMUST00000158430 104 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm23581-201ENSMUST00000158531 63 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm22800-201ENSMUST00000175627 94 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm24799-201ENSMUST00000178431 79 ntBASIC2.06□□□□□ -2.08
NcanP55066 Mir7678-201ENSMUST00000185076 71 ntBASIC2.06□□□□□ -2.08
NcanP55066 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.06□□□□□ -2.08
NcanP55066 Trbv6-201ENSMUST00000193743 276 ntBASIC2.06□□□□□ -2.08
NcanP55066 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NcanP55066 Mir7232-201ENSMUST00000197929 74 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm44429-201ENSMUST00000203542 186 ntBASIC2.06□□□□□ -2.08
NcanP55066 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.06□□□□□ -2.08
NcanP55066 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NcanP55066 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NcanP55066 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NcanP55066 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NcanP55066 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.06□□□□□ -2.08
NcanP55066 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.05□□□□□ -2.08
NcanP55066 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NcanP55066 Gm22151-201ENSMUST00000116963 58 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm25543-201ENSMUST00000122678 312 ntBASIC2.05□□□□□ -2.08
NcanP55066 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NcanP55066 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NcanP55066 Gm23328-201ENSMUST00000157418 132 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm23381-201ENSMUST00000157676 94 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm23642-201ENSMUST00000157858 258 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm24348-201ENSMUST00000158710 130 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm23921-201ENSMUST00000175258 107 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm23977-201ENSMUST00000177871 74 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.05□□□□□ -2.08
NcanP55066 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.05□□□□□ -2.08
NcanP55066 Mir7116-201ENSMUST00000195956 70 ntBASIC2.05□□□□□ -2.08
NcanP55066 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.05□□□□□ -2.08
NcanP55066 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm22062-201ENSMUST00000082563 107 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm25793-201ENSMUST00000083287 107 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm23246-201ENSMUST00000083371 67 ntBASIC2.05□□□□□ -2.08
NcanP55066 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.05□□□□□ -2.08
NcanP55066 Gm26329-201ENSMUST00000093723 110 ntBASIC2.05□□□□□ -2.08
NcanP55066 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.05□□□□□ -2.08
NcanP55066 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NcanP55066 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm13885-201ENSMUST00000117569 187 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm14923-201ENSMUST00000118270 155 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm15365-201ENSMUST00000122392 300 ntBASIC2.04□□□□□ -2.08
NcanP55066 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm22447-201ENSMUST00000158155 92 ntBASIC2.04□□□□□ -2.08
NcanP55066 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm24308-201ENSMUST00000177773 114 ntBASIC2.04□□□□□ -2.08
NcanP55066 Mir7016-201ENSMUST00000184308 72 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm28257-201ENSMUST00000185244 463 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm29665-201ENSMUST00000191457 528 ntBASIC2.04□□□□□ -2.08
NcanP55066 Mir3069-201ENSMUST00000198802 65 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm43583-201ENSMUST00000199235 303 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm44959-201ENSMUST00000209127 231 ntBASIC2.04□□□□□ -2.08
NcanP55066 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NcanP55066 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.04□□□□□ -2.08
NcanP55066 Gm22685-201ENSMUST00000082848 106 ntBASIC2.04□□□□□ -2.08
NcanP55066 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.04□□□□□ -2.08
NcanP55066 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
NcanP55066 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.03□□□□□ -2.08
NcanP55066 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NcanP55066 Mir872-201ENSMUST00000104728 81 ntBASIC2.03□□□□□ -2.08
NcanP55066 Gm22678-201ENSMUST00000116974 101 ntBASIC2.03□□□□□ -2.08
NcanP55066 Gm12647-201ENSMUST00000118977 265 ntBASIC2.03□□□□□ -2.08
NcanP55066 Gm23760-201ENSMUST00000158350 116 ntBASIC2.03□□□□□ -2.08
NcanP55066 Snord11-201ENSMUST00000158468 84 ntBASIC2.03□□□□□ -2.08
NcanP55066 Mir28b-201ENSMUST00000175399 80 ntBASIC2.03□□□□□ -2.08
NcanP55066 Gm22114-201ENSMUST00000177756 107 ntBASIC2.03□□□□□ -2.08
NcanP55066 Gm27979-201ENSMUST00000185126 56 ntBASIC2.03□□□□□ -2.08
NcanP55066 Gm29005-201ENSMUST00000186773 320 ntBASIC2.03□□□□□ -2.08
NcanP55066 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NcanP55066 Gm44358-201ENSMUST00000196301 98 ntBASIC2.03□□□□□ -2.08
NcanP55066 Mir7217-201ENSMUST00000200304 62 ntBASIC2.03□□□□□ -2.08
NcanP55066 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.03□□□□□ -2.08
NcanP55066 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.03□□□□□ -2.08
NcanP55066 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.03□□□□□ -2.08
NcanP55066 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.03□□□□□ -2.08
NcanP55066 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
NcanP55066 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.02□□□□□ -2.09
NcanP55066 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NcanP55066 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
NcanP55066 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.02□□□□□ -2.09
NcanP55066 Gm25933-201ENSMUST00000178943 108 ntBASIC2.02□□□□□ -2.09
NcanP55066 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NcanP55066 Gm44182-201ENSMUST00000204052 115 ntBASIC2.02□□□□□ -2.09
NcanP55066 Gm44055-201ENSMUST00000204376 247 ntBASIC2.02□□□□□ -2.09
NcanP55066 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NcanP55066 Gm26447-201ENSMUST00000082448 129 ntBASIC2.02□□□□□ -2.09
NcanP55066 Gm25796-201ENSMUST00000082645 163 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 220.6 ms