Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.21□□□□□ -2.06
Cbx4O55187 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.21□□□□□ -2.06
Cbx4O55187 Gm11351-202ENSMUST00000225724 478 ntBASIC2.21□□□□□ -2.06
Cbx4O55187 Gm24977-201ENSMUST00000083106 163 ntBASIC2.21□□□□□ -2.06
Cbx4O55187 Snora34-201ENSMUST00000083402 138 ntBASIC2.21□□□□□ -2.06
Cbx4O55187 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Cbx4O55187 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Cbx4O55187 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.21□□□□□ -2.06
Cbx4O55187 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Cbx4O55187 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.2□□□□□ -2.06
Cbx4O55187 Gm23892-201ENSMUST00000158105 130 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Gm2962-201ENSMUST00000159266 336 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Gm24415-201ENSMUST00000180218 107 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Gm28992-201ENSMUST00000190534 139 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Mir6925-201ENSMUST00000197857 70 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Gm44666-201ENSMUST00000208544 391 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Gm24042-201ENSMUST00000083114 103 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Gm22972-201ENSMUST00000083297 131 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Cbx4O55187 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Cbx4O55187 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.2□□□□□ -2.06
Cbx4O55187 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Cbx4O55187 Gm12417-201ENSMUST00000119153 403 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm22281-201ENSMUST00000157198 103 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm24900-201ENSMUST00000158128 134 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm22433-201ENSMUST00000158550 142 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm16326-201ENSMUST00000162843 414 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm24304-201ENSMUST00000177635 107 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm27399-201ENSMUST00000184250 78 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm27753-201ENSMUST00000184742 203 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm28627-201ENSMUST00000186141 453 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm19123-201ENSMUST00000190716 651 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.19□□□□□ -2.06
Cbx4O55187 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Cbx4O55187 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Cbx4O55187 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Cbx4O55187 Mir541-201ENSMUST00000102097 90 ntBASIC2.18□□□□□ -2.06
Cbx4O55187 Mir767-201ENSMUST00000103256 107 ntBASIC2.18□□□□□ -2.06
Cbx4O55187 Gm25711-201ENSMUST00000158633 128 ntBASIC2.18□□□□□ -2.06
Cbx4O55187 Gm27991-201ENSMUST00000184804 137 ntBASIC2.18□□□□□ -2.06
Cbx4O55187 Gm37918-201ENSMUST00000192071 120 ntBASIC2.18□□□□□ -2.06
Cbx4O55187 Gm44533-201ENSMUST00000207782 268 ntBASIC2.18□□□□□ -2.06
Cbx4O55187 Snord104-201ENSMUST00000083192 70 ntBASIC2.18□□□□□ -2.06
Cbx4O55187 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Cbx4O55187 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.18□□□□□ -2.06
Cbx4O55187 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Cbx4O55187 Gm25316-201ENSMUST00000116826 118 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Gm25115-201ENSMUST00000157187 140 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Gm22083-201ENSMUST00000157586 102 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Gm23858-201ENSMUST00000158384 106 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Gm24006-201ENSMUST00000158462 132 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Gm37715-201ENSMUST00000193206 235 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Mir7215-201ENSMUST00000200383 51 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Gm45013-201ENSMUST00000206883 178 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.17□□□□□ -2.06
Cbx4O55187 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm22151-201ENSMUST00000116963 58 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm12512-201ENSMUST00000119620 217 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm22145-201ENSMUST00000157396 148 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm23536-201ENSMUST00000157541 134 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm27421-201ENSMUST00000184729 167 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.16□□□□□ -2.06
Cbx4O55187 Gm42834-201ENSMUST00000196845 256 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm42672-201ENSMUST00000197821 352 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm44477-201ENSMUST00000199661 110 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm44564-201ENSMUST00000207985 180 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.16□□□□□ -2.06
Cbx4O55187 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 Gm24698-201ENSMUST00000083883 130 ntBASIC2.16□□□□□ -2.06
Cbx4O55187 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Cbx4O55187 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Cbx4O55187 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Cbx4O55187 Gm24283-201ENSMUST00000104233 107 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 Gm23836-201ENSMUST00000104434 129 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 Gm16510-201ENSMUST00000153501 249 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 Gm23901-201ENSMUST00000157570 107 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 Gm17052-201ENSMUST00000165496 289 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Cbx4O55187 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.15□□□□□ -2.07
Cbx4O55187 Gm45150-201ENSMUST00000206051 467 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.15□□□□□ -2.07
Cbx4O55187 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.14□□□□□ -2.07
Cbx4O55187 Gm26135-201ENSMUST00000101993 72 ntBASIC2.14□□□□□ -2.07
Cbx4O55187 Gm24121-201ENSMUST00000102029 106 ntBASIC2.14□□□□□ -2.07
Cbx4O55187 Gm24640-201ENSMUST00000116949 126 ntBASIC2.14□□□□□ -2.07
Cbx4O55187 Gm22626-201ENSMUST00000116990 126 ntBASIC2.14□□□□□ -2.07
Cbx4O55187 Gm12771-201ENSMUST00000120246 135 ntBASIC2.14□□□□□ -2.07
Cbx4O55187 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.14□□□□□ -2.07
Cbx4O55187 Gm22097-201ENSMUST00000157929 278 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms