Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm13475-201ENSMUST00000119290 234 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Gm14713-201ENSMUST00000122362 686 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Gm23106-201ENSMUST00000157554 101 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Gm23025-201ENSMUST00000158769 111 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Gm20386-201ENSMUST00000174010 132 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Snord38a-201ENSMUST00000083746 71 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.72□□□□□ -2.29
Rpa3Q9CQ71 Mir465c-2-201ENSMUST00000104757 81 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm11862-201ENSMUST00000119678 659 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm26278-201ENSMUST00000157098 132 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm23352-201ENSMUST00000158428 64 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm26501-201ENSMUST00000178307 107 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm27271-201ENSMUST00000183509 170 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm28926-201ENSMUST00000191063 680 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm37641-201ENSMUST00000193837 239 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm38395-201ENSMUST00000199904 830 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Mir465c-1-201ENSMUST00000093560 81 ntBASIC0.71□□□□□ -2.3
Rpa3Q9CQ71 Gm23836-201ENSMUST00000104434 129 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Mir1936-201ENSMUST00000158699 93 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Gm23355-201ENSMUST00000177614 107 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Gm27974-201ENSMUST00000183415 105 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Gm28257-201ENSMUST00000185244 463 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Gm26379-202ENSMUST00000200225 132 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Gm45315-201ENSMUST00000209283 333 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Gm32300-201ENSMUST00000221735 515 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Gm23721-201ENSMUST00000083005 107 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.7□□□□□ -2.3
Rpa3Q9CQ71 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.69□□□□□ -2.3
Rpa3Q9CQ71 Gm26339-201ENSMUST00000102368 99 ntBASIC0.69□□□□□ -2.3
Rpa3Q9CQ71 Gm13967-201ENSMUST00000120404 380 ntBASIC0.69□□□□□ -2.3
Rpa3Q9CQ71 Gm11389-201ENSMUST00000121407 430 ntBASIC0.69□□□□□ -2.3
Rpa3Q9CQ71 AL929265.1-201ENSMUST00000213427 125 ntBASIC0.69□□□□□ -2.3
Rpa3Q9CQ71 Gm22306-201ENSMUST00000082692 107 ntBASIC0.69□□□□□ -2.3
Rpa3Q9CQ71 Gm25851-201ENSMUST00000082794 107 ntBASIC0.69□□□□□ -2.3
Rpa3Q9CQ71 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm23340-201ENSMUST00000158955 123 ntBASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Mir496b-201ENSMUST00000184935 113 ntBASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm28438-201ENSMUST00000188299 345 ntBASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm44830-201ENSMUST00000207667 584 ntBASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Mir410-201ENSMUST00000083563 81 ntBASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.68□□□□□ -2.3
Rpa3Q9CQ71 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Gm24191-201ENSMUST00000157977 122 ntBASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Gm25011-201ENSMUST00000158398 126 ntBASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Gm23114-201ENSMUST00000158478 117 ntBASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Mir6540-201ENSMUST00000184886 108 ntBASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Gm28848-201ENSMUST00000189984 168 ntBASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Gm37869-201ENSMUST00000193385 595 ntBASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Gm44135-201ENSMUST00000205221 368 ntBASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 Gm10264-201ENSMUST00000220589 429 ntBASIC0.67□□□□□ -2.3
Rpa3Q9CQ71 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm25876-201ENSMUST00000104329 119 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm22515-201ENSMUST00000158273 305 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm18417-201ENSMUST00000176564 648 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm22631-201ENSMUST00000179656 94 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm27545-201ENSMUST00000184755 202 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm38261-201ENSMUST00000192608 316 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm44282-201ENSMUST00000203199 190 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm44142-201ENSMUST00000203358 311 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 AC121844.1-201ENSMUST00000218706 137 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.66□□□□□ -2.3
Rpa3Q9CQ71 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Gm25544-201ENSMUST00000122676 120 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Gm23523-201ENSMUST00000180190 107 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Gm28414-201ENSMUST00000190111 294 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Gm42855-201ENSMUST00000197388 253 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Gm24261-201ENSMUST00000083744 104 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Gm26314-201ENSMUST00000083891 107 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.65□□□□□ -2.31
Rpa3Q9CQ71 Gm11512-201ENSMUST00000119669 663 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 394.5 ms