Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Brf1Q8CFK2 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Gm23988-201ENSMUST00000117034 122 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Gm14843-201ENSMUST00000119596 212 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Gm23470-201ENSMUST00000157129 120 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Gm25015-201ENSMUST00000158400 128 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Mir1936-201ENSMUST00000158699 93 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Gm16326-201ENSMUST00000162843 414 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Gm22911-201ENSMUST00000177920 107 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Brf1Q8CFK2 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Gm23461-201ENSMUST00000083265 107 ntBASIC2.86□□□□□ -1.95
Brf1Q8CFK2 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm22782-201ENSMUST00000104082 132 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Snord19-201ENSMUST00000104609 76 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm24683-201ENSMUST00000104840 88 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm24274-201ENSMUST00000116787 124 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm22193-201ENSMUST00000116868 76 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm6954-201ENSMUST00000117416 225 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm24053-201ENSMUST00000158620 105 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm25834-201ENSMUST00000158916 101 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Mir7081-201ENSMUST00000184490 75 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm6801-201ENSMUST00000190697 339 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm44563-201ENSMUST00000207958 178 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm25628-201ENSMUST00000084002 105 ntBASIC2.85□□□□□ -1.95
Brf1Q8CFK2 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm24068-201ENSMUST00000104513 132 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Snord72-201ENSMUST00000104549 81 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm13885-201ENSMUST00000117569 187 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm26026-201ENSMUST00000122726 123 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm24896-201ENSMUST00000122741 135 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm23536-201ENSMUST00000157541 134 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Mir1967-201ENSMUST00000157789 82 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm22500-201ENSMUST00000158982 99 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm25933-201ENSMUST00000178943 108 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm42834-201ENSMUST00000196845 256 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Gm43676-201ENSMUST00000197532 540 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.84□□□□□ -1.95
Brf1Q8CFK2 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm12512-201ENSMUST00000119620 217 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm22281-201ENSMUST00000157198 103 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm22217-201ENSMUST00000157556 313 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm25488-201ENSMUST00000158728 118 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm27699-201ENSMUST00000183553 180 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Mir7062-201ENSMUST00000185038 66 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm37918-201ENSMUST00000192071 120 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Gm24977-201ENSMUST00000083106 163 ntBASIC2.83□□□□□ -1.96
Brf1Q8CFK2 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Gm23889-201ENSMUST00000122689 104 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Gm26279-201ENSMUST00000157095 102 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Gm23381-201ENSMUST00000157676 94 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Gm25888-201ENSMUST00000157778 302 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Gm28992-201ENSMUST00000190534 139 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Mir1291-201ENSMUST00000199842 117 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Gm9174-201ENSMUST00000078149 255 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Snora34-201ENSMUST00000083402 138 ntBASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Brf1Q8CFK2 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Gm26135-201ENSMUST00000101993 72 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Gm24283-201ENSMUST00000104233 107 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Mir1195-201ENSMUST00000116818 98 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Snord50b-201ENSMUST00000178497 72 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Mir6405-201ENSMUST00000184584 124 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Gm27369-201ENSMUST00000185182 71 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
Brf1Q8CFK2 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Gm26126-201ENSMUST00000083188 164 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Gm22972-201ENSMUST00000083297 131 ntBASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Brf1Q8CFK2 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.8□□□□□ -1.96
Brf1Q8CFK2 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Brf1Q8CFK2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Brf1Q8CFK2 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.8□□□□□ -1.96
Brf1Q8CFK2 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.8□□□□□ -1.96
Brf1Q8CFK2 Gm25935-201ENSMUST00000178746 107 ntBASIC2.8□□□□□ -1.96
Brf1Q8CFK2 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.8□□□□□ -1.96
Brf1Q8CFK2 Gm37081-201ENSMUST00000192034 196 ntBASIC2.8□□□□□ -1.96
Brf1Q8CFK2 Gm43722-201ENSMUST00000196054 124 ntBASIC2.8□□□□□ -1.96
Brf1Q8CFK2 Gm44352-201ENSMUST00000196358 110 ntBASIC2.8□□□□□ -1.96
Brf1Q8CFK2 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 320 ms