Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm22259-201ENSMUST00000178926 107 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm24761-201ENSMUST00000179589 127 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm25024-201ENSMUST00000179667 104 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm24488-201ENSMUST00000179934 127 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm25701-201ENSMUST00000179988 127 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm26431-201ENSMUST00000180199 127 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm27991-201ENSMUST00000184804 137 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm44429-201ENSMUST00000203542 186 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm10092-201ENSMUST00000077110 180 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm23444-201ENSMUST00000082922 191 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm25401-201ENSMUST00000082975 106 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm26495-201ENSMUST00000083152 137 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm24163-201ENSMUST00000093660 132 ntBASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Upk3bQ80YF6 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.78□□□□□ -2.13
Upk3bQ80YF6 Gm12351-201ENSMUST00000118727 292 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Trav20-201ENSMUST00000142754 347 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm20613-201ENSMUST00000175828 345 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm20630-201ENSMUST00000177387 551 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm17067-202ENSMUST00000180131 123 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm27271-201ENSMUST00000183509 170 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm37089-201ENSMUST00000195616 129 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Mir6925-201ENSMUST00000197857 70 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm23462-201ENSMUST00000083264 104 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm26265-201ENSMUST00000083277 135 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm24762-201ENSMUST00000083689 104 ntBASIC1.77□□□□□ -2.13
Upk3bQ80YF6 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Mir344c-201ENSMUST00000103919 92 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Snord72-201ENSMUST00000104549 81 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm22713-201ENSMUST00000116895 130 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm12793-201ENSMUST00000119268 292 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm14881-201ENSMUST00000120366 372 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm22027-201ENSMUST00000122737 127 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm26279-201ENSMUST00000157095 102 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm22145-201ENSMUST00000157396 148 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm23381-201ENSMUST00000157676 94 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm25888-201ENSMUST00000157778 302 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm2962-201ENSMUST00000159266 336 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm24304-201ENSMUST00000177635 107 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Mir7016-201ENSMUST00000184308 72 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm27753-201ENSMUST00000184742 203 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Mir6540-201ENSMUST00000184886 108 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm29167-201ENSMUST00000190024 377 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm29262-201ENSMUST00000190084 196 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm37763-201ENSMUST00000193445 120 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm43563-201ENSMUST00000196761 198 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm3724-201ENSMUST00000197957 349 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm20144-201ENSMUST00000203031 165 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm44977-201ENSMUST00000205283 420 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm45002-201ENSMUST00000208045 120 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm18991-201ENSMUST00000209225 746 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm11351-202ENSMUST00000225724 478 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Mir93-201ENSMUST00000083593 88 ntBASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Upk3bQ80YF6 Gm22494-201ENSMUST00000104495 128 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm24403-201ENSMUST00000104616 130 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm23889-201ENSMUST00000122689 104 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm23536-201ENSMUST00000157541 134 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm24691-201ENSMUST00000157762 140 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm23342-201ENSMUST00000158958 115 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Mir3076-201ENSMUST00000175415 60 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm25615-201ENSMUST00000177836 94 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm25933-201ENSMUST00000178943 108 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm42672-201ENSMUST00000197821 352 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm25589-201ENSMUST00000082502 166 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Gm24356-201ENSMUST00000082859 106 ntBASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Upk3bQ80YF6 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm25961-201ENSMUST00000157174 135 ntBASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm24237-201ENSMUST00000157790 132 ntBASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm25368-201ENSMUST00000158847 131 ntBASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm23813-201ENSMUST00000175153 77 ntBASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm25749-201ENSMUST00000175485 111 ntBASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm26265-202ENSMUST00000196326 133 ntBASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm5899-201ENSMUST00000071770 270 ntBASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Upk3bQ80YF6 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Upk3bQ80YF6 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 141.1 ms