Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm25749-201ENSMUST00000175485 111 ntBASIC2.53□□□□□ -2
Usp49Q6P9L4 Gm20630-201ENSMUST00000177387 551 ntBASIC2.53□□□□□ -2
Usp49Q6P9L4 Gm22264-201ENSMUST00000178200 107 ntBASIC2.53□□□□□ -2
Usp49Q6P9L4 Gm19901-201ENSMUST00000192191 495 ntBASIC2.53□□□□□ -2
Usp49Q6P9L4 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.53□□□□□ -2
Usp49Q6P9L4 Gm44477-201ENSMUST00000199661 110 ntBASIC2.53□□□□□ -2
Usp49Q6P9L4 Gm20144-201ENSMUST00000203031 165 ntBASIC2.53□□□□□ -2
Usp49Q6P9L4 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.53□□□□□ -2
Usp49Q6P9L4 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Usp49Q6P9L4 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.53□□□□□ -2.01
Usp49Q6P9L4 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm23836-201ENSMUST00000104434 129 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm24480-201ENSMUST00000157442 103 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm22450-201ENSMUST00000179641 107 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm25235-201ENSMUST00000179933 107 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm25473-201ENSMUST00000180191 107 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Mir6540-201ENSMUST00000184886 108 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm45543-201ENSMUST00000209327 88 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm24856-201ENSMUST00000082809 107 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm26071-201ENSMUST00000083261 107 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm24521-201ENSMUST00000083958 107 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm24163-201ENSMUST00000093660 132 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Gm24164-201ENSMUST00000093663 104 ntBASIC2.52□□□□□ -2.01
Usp49Q6P9L4 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm23951-201ENSMUST00000104029 132 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm22784-201ENSMUST00000104088 132 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm11786-201ENSMUST00000120799 155 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm16561-201ENSMUST00000163001 192 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm25024-201ENSMUST00000179667 104 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm29657-201ENSMUST00000189807 342 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Mir6925-201ENSMUST00000197857 70 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm45859-201ENSMUST00000212794 214 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Gm24966-201ENSMUST00000082443 79 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.51□□□□□ -2.01
Usp49Q6P9L4 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.51□□□□□ -2.01
Usp49Q6P9L4 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm14602-201ENSMUST00000118625 340 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm13913-201ENSMUST00000121126 260 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm14922-201ENSMUST00000121131 163 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm23219-201ENSMUST00000158123 87 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm24392-201ENSMUST00000158136 103 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Snord11-201ENSMUST00000158468 84 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm24769-201ENSMUST00000158506 129 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm24667-201ENSMUST00000158938 103 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm25253-201ENSMUST00000179958 107 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm28453-203ENSMUST00000187041 189 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm19123-201ENSMUST00000190716 651 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.5□□□□□ -2.01
Usp49Q6P9L4 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.5□□□□□ -2.01
Usp49Q6P9L4 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Gm24355-201ENSMUST00000082858 122 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Usp49Q6P9L4 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm23705-201ENSMUST00000104370 130 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm13885-201ENSMUST00000117569 187 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm13433-201ENSMUST00000121701 240 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm22883-201ENSMUST00000157376 106 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm23381-201ENSMUST00000157676 94 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm25933-201ENSMUST00000178943 108 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm42774-201ENSMUST00000198854 283 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm44478-201ENSMUST00000204875 114 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm10092-201ENSMUST00000077110 180 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm25130-201ENSMUST00000082650 156 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Gm25789-201ENSMUST00000083294 76 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Usp49Q6P9L4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Usp49Q6P9L4 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm15162-201ENSMUST00000119325 283 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm22083-201ENSMUST00000157586 102 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm25888-201ENSMUST00000157778 302 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm25488-201ENSMUST00000158728 118 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm16326-201ENSMUST00000162843 414 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm7958-201ENSMUST00000178255 468 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm7950-201ENSMUST00000179633 468 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm27793-201ENSMUST00000183405 76 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Mir7226-201ENSMUST00000184953 60 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm43220-201ENSMUST00000199299 282 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm43993-201ENSMUST00000203972 247 ntBASIC2.48□□□□□ -2.01
Usp49Q6P9L4 Gm44853-201ENSMUST00000209070 250 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 719.3 ms