Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm18357-201ENSMUST00000188184 580 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm28160-201ENSMUST00000191229 315 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm37713-201ENSMUST00000191746 198 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm37129-201ENSMUST00000195791 315 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm45365-201ENSMUST00000209489 256 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm25078-201ENSMUST00000082530 107 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm23246-201ENSMUST00000083371 67 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm23845-201ENSMUST00000083834 152 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm15215-201ENSMUST00000117773 489 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm11786-201ENSMUST00000120799 155 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm25059-201ENSMUST00000157367 117 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm23535-201ENSMUST00000157542 106 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm23381-201ENSMUST00000157676 94 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm22447-201ENSMUST00000158155 92 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm22664-201ENSMUST00000158719 105 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm25956-201ENSMUST00000175115 217 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm27271-201ENSMUST00000183509 170 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm19901-201ENSMUST00000192191 495 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm25820-202ENSMUST00000197479 128 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Mir7227-201ENSMUST00000200408 59 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm44429-201ENSMUST00000203542 186 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm24460-201ENSMUST00000082731 106 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm24764-201ENSMUST00000083686 199 ntBASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Trim58Q5NCC9 Gm22750-201ENSMUST00000102076 103 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Mir1b-201ENSMUST00000117012 122 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm13729-201ENSMUST00000120328 406 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm13992-201ENSMUST00000120558 156 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm13725-201ENSMUST00000122139 207 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm24630-201ENSMUST00000122768 106 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm25961-201ENSMUST00000157174 135 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm23474-201ENSMUST00000158884 75 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Mir5624-201ENSMUST00000176635 61 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm29140-201ENSMUST00000190187 476 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm37338-201ENSMUST00000191986 127 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm26265-202ENSMUST00000196326 133 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Mir3970-201ENSMUST00000199287 90 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm43993-201ENSMUST00000203972 247 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm45296-201ENSMUST00000209625 205 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm23055-201ENSMUST00000082805 94 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Gm22571-201ENSMUST00000082984 70 ntBASIC1.87□□□□□ -2.11
Trim58Q5NCC9 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Gm12351-201ENSMUST00000118727 292 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Gm22814-201ENSMUST00000157452 104 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Gm25888-201ENSMUST00000157778 302 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Gm25996-201ENSMUST00000175393 117 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Gm25450-201ENSMUST00000179144 107 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Mir7215-201ENSMUST00000200383 51 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Gm45386-201ENSMUST00000210194 218 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Gm25930-201ENSMUST00000082785 107 ntBASIC1.86□□□□□ -2.11
Trim58Q5NCC9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm22713-201ENSMUST00000116895 130 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm11854-201ENSMUST00000117839 446 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm11862-201ENSMUST00000119678 659 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm25805-201ENSMUST00000122788 108 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm24053-201ENSMUST00000158620 105 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm7592-201ENSMUST00000160674 627 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm20923-201ENSMUST00000190009 319 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm21088-201ENSMUST00000190875 316 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm29665-201ENSMUST00000191457 528 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm32175-201ENSMUST00000193641 346 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm42594-201ENSMUST00000199511 246 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.85□□□□□ -2.11
Trim58Q5NCC9 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Gm25589-201ENSMUST00000082502 166 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.85□□□□□ -2.11
Trim58Q5NCC9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Mir875-201ENSMUST00000104698 78 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm23048-201ENSMUST00000157237 129 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm22963-201ENSMUST00000157960 91 ntBASIC1.84□□□□□ -2.11
Trim58Q5NCC9 Gm22011-201ENSMUST00000158790 123 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 362.5 ms