Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm24501-201ENSMUST00000158452 62 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm24333-201ENSMUST00000175101 84 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm18546-201ENSMUST00000197245 676 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Mir376a-201ENSMUST00000197584 68 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm42960-201ENSMUST00000202160 241 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm5899-201ENSMUST00000071770 270 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm25130-201ENSMUST00000082650 156 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Gm22294-201ENSMUST00000083308 104 ntBASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trim40Q3UWA4 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Trim40Q3UWA4 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm23015-201ENSMUST00000104145 128 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm25529-201ENSMUST00000104850 92 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm14674-201ENSMUST00000117816 342 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm15002-201ENSMUST00000118406 452 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm23214-201ENSMUST00000122716 157 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm22221-201ENSMUST00000157362 103 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm22215-201ENSMUST00000157558 96 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm24818-201ENSMUST00000175093 161 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm23860-201ENSMUST00000179446 132 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm27793-201ENSMUST00000183405 76 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.7□□□□□ -2.14
Trim40Q3UWA4 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm25930-201ENSMUST00000082785 107 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Gm24316-201ENSMUST00000083041 107 ntBASIC1.7□□□□□ -2.14
Trim40Q3UWA4 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Mir374b-201ENSMUST00000102314 95 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm23013-201ENSMUST00000104146 106 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Mir1195-201ENSMUST00000116818 98 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm11322-201ENSMUST00000118095 435 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm12837-201ENSMUST00000120131 373 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm13725-201ENSMUST00000122139 207 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm22386-201ENSMUST00000158192 129 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Mir3086-201ENSMUST00000175072 87 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm22448-201ENSMUST00000179254 107 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm24390-201ENSMUST00000179578 62 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm27443-201ENSMUST00000184660 98 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm37801-201ENSMUST00000194754 274 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm24625-201ENSMUST00000082622 130 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm22299-201ENSMUST00000082663 136 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.69□□□□□ -2.14
Trim40Q3UWA4 Gm23941-201ENSMUST00000101953 107 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm13714-201ENSMUST00000117313 221 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm12941-201ENSMUST00000117934 220 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm11598-201ENSMUST00000119257 357 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm22281-201ENSMUST00000157198 103 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm24222-201ENSMUST00000158834 93 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm24572-201ENSMUST00000175505 88 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm23090-201ENSMUST00000177331 78 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Mir3535-201ENSMUST00000197651 147 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm43220-201ENSMUST00000199299 282 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm45005-201ENSMUST00000206640 157 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm46997-201ENSMUST00000222108 217 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm11351-202ENSMUST00000225724 478 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm23055-201ENSMUST00000082805 94 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm24805-201ENSMUST00000082931 104 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm24615-201ENSMUST00000083268 113 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm25789-201ENSMUST00000083294 76 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm24163-201ENSMUST00000093660 132 ntBASIC1.68□□□□□ -2.14
Trim40Q3UWA4 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trim40Q3UWA4 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm24116-201ENSMUST00000103975 107 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm11794-201ENSMUST00000119446 237 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm22537-201ENSMUST00000158172 199 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm26435-201ENSMUST00000179026 107 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm27540-201ENSMUST00000184950 187 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm37918-201ENSMUST00000192071 120 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Mir3961-201ENSMUST00000198795 59 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm42594-201ENSMUST00000199511 246 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm44256-201ENSMUST00000203304 335 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm45013-201ENSMUST00000206883 178 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm44533-201ENSMUST00000207782 268 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm25813-201ENSMUST00000082748 191 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm22287-201ENSMUST00000083197 107 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Mir222-201ENSMUST00000083537 79 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.67□□□□□ -2.14
Trim40Q3UWA4 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Trim40Q3UWA4 Mir344e-201ENSMUST00000104677 66 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms