Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.11□□□□□ -2.07
NcanP55066 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NcanP55066 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NcanP55066 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm22761-201ENSMUST00000102278 96 ntBASIC2.1□□□□□ -2.07
NcanP55066 Snord70-201ENSMUST00000104157 87 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm15010-201ENSMUST00000117153 407 ntBASIC2.1□□□□□ -2.07
NcanP55066 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm24618-201ENSMUST00000177718 94 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm23953-201ENSMUST00000178214 94 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm22448-201ENSMUST00000179254 107 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm26332-201ENSMUST00000179813 94 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm22863-201ENSMUST00000180265 94 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm28951-201ENSMUST00000190742 313 ntBASIC2.1□□□□□ -2.07
NcanP55066 Trbv18-201ENSMUST00000194256 294 ntBASIC2.1□□□□□ -2.07
NcanP55066 Mir7227-201ENSMUST00000200408 59 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm45616-201ENSMUST00000211711 319 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm2829-201ENSMUST00000213121 499 ntBASIC2.1□□□□□ -2.07
NcanP55066 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.1□□□□□ -2.07
NcanP55066 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.1□□□□□ -2.07
NcanP55066 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.1□□□□□ -2.07
NcanP55066 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NcanP55066 Gm24313-201ENSMUST00000082561 133 ntBASIC2.1□□□□□ -2.07
NcanP55066 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.1□□□□□ -2.07
NcanP55066 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
NcanP55066 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.09□□□□□ -2.07
NcanP55066 Mdga2-203ENSMUST00000113942 423 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm25321-201ENSMUST00000122558 102 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm22598-201ENSMUST00000157600 127 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm22483-201ENSMUST00000157986 274 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm24726-201ENSMUST00000158232 121 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm25012-201ENSMUST00000158396 164 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm17100-201ENSMUST00000168963 272 ntBASIC2.09□□□□□ -2.07
NcanP55066 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm25020-201ENSMUST00000178071 107 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm28848-201ENSMUST00000189984 168 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm28288-201ENSMUST00000191019 214 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
NcanP55066 Mir6375-201ENSMUST00000197176 95 ntBASIC2.09□□□□□ -2.07
NcanP55066 Mir3970-201ENSMUST00000199287 90 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm43914-201ENSMUST00000203592 594 ntBASIC2.09□□□□□ -2.07
NcanP55066 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm44655-201ENSMUST00000207768 423 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm25813-201ENSMUST00000082748 191 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm26265-201ENSMUST00000083277 135 ntBASIC2.09□□□□□ -2.07
NcanP55066 Gm26500-201ENSMUST00000101867 106 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm26156-201ENSMUST00000116999 123 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm23783-201ENSMUST00000157941 102 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm25831-201ENSMUST00000158924 163 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm22258-201ENSMUST00000177645 94 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm26032-201ENSMUST00000178535 94 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm25210-201ENSMUST00000178813 94 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm25157-201ENSMUST00000178914 94 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm22046-201ENSMUST00000179027 94 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm22941-201ENSMUST00000179630 94 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm25471-201ENSMUST00000180126 94 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.08□□□□□ -2.08
NcanP55066 Gm45207-201ENSMUST00000207469 145 ntBASIC2.08□□□□□ -2.08
NcanP55066 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.08□□□□□ -2.08
NcanP55066 Gm18991-201ENSMUST00000209225 746 ntBASIC2.08□□□□□ -2.08
NcanP55066 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.08□□□□□ -2.08
NcanP55066 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NcanP55066 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.08□□□□□ -2.08
NcanP55066 Gm22978-201ENSMUST00000082607 160 ntBASIC2.08□□□□□ -2.08
NcanP55066 Gm24044-201ENSMUST00000083107 156 ntBASIC2.08□□□□□ -2.08
NcanP55066 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.07□□□□□ -2.08
NcanP55066 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NcanP55066 Gm11935-201ENSMUST00000118608 399 ntBASIC2.07□□□□□ -2.08
NcanP55066 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.07□□□□□ -2.08
NcanP55066 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm14298-201ENSMUST00000139032 237 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm16356-201ENSMUST00000143300 169 ntBASIC2.07□□□□□ -2.08
NcanP55066 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm24900-201ENSMUST00000158128 134 ntBASIC2.07□□□□□ -2.08
NcanP55066 Mir1927-201ENSMUST00000158579 109 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm23342-201ENSMUST00000158958 115 ntBASIC2.07□□□□□ -2.08
NcanP55066 Mir6399-201ENSMUST00000184050 84 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm29512-201ENSMUST00000185544 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28110-201ENSMUST00000185782 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm29057-201ENSMUST00000186468 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm29661-201ENSMUST00000186781 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28737-201ENSMUST00000186808 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm29118-201ENSMUST00000186908 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28433-201ENSMUST00000187085 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28759-201ENSMUST00000187621 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28831-201ENSMUST00000187739 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28752-201ENSMUST00000188340 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28569-201ENSMUST00000188748 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28120-201ENSMUST00000188812 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28369-201ENSMUST00000188993 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm29037-201ENSMUST00000189092 313 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm28861-201ENSMUST00000189681 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm29180-201ENSMUST00000190003 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm29575-201ENSMUST00000190597 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm29469-201ENSMUST00000191448 315 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm44409-201ENSMUST00000198810 166 ntBASIC2.07□□□□□ -2.08
NcanP55066 Gm44960-201ENSMUST00000207403 141 ntBASIC2.07□□□□□ -2.08
NcanP55066 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.07□□□□□ -2.08
NcanP55066 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms