Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 SERINC2-203ENST00000487207 735 ntTSL 217.96■□□□□ 0.472e-14■■□□□ 13.3
DKC1O60832 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.91■□□□□ 0.462e-14■■□□□ 13.3
DKC1O60832 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.86■□□□□ 0.452e-14■■□□□ 13.3
DKC1O60832 SERINC2-204ENST00000491976 2807 ntTSL 217.75■□□□□ 0.432e-14■■□□□ 13.3
DKC1O60832 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.39■□□□□ 0.212e-14■■□□□ 13.3
DKC1O60832 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.83■□□□□ 0.125e-7■■□□□ 13.2
DKC1O60832 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC12.82□□□□□ -0.365e-7■■□□□ 13.2
DKC1O60832 SNHG1-209ENST00000538654 2768 ntTSL 29.29□□□□□ -0.925e-7■■□□□ 13.2
DKC1O60832 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.86□□□□□ -1.475e-7■■□□□ 13.2
DKC1O60832 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.5□□□□□ -1.695e-7■■□□□ 13.2
DKC1O60832 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.65■■□□□ 1.863e-7■■□□□ 13.2
DKC1O60832 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.463e-7■■□□□ 13.2
DKC1O60832 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.12■□□□□ 0.339e-8■■□□□ 13.2
DKC1O60832 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.533e-7■■□□□ 13.2
DKC1O60832 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.533e-7■■□□□ 13.2
DKC1O60832 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.533e-7■■□□□ 13.2
DKC1O60832 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.081e-5■■□□□ 13.2
DKC1O60832 CSNK1G2-205ENST00000589385 896 ntTSL 520.71■□□□□ 0.911e-5■■□□□ 13.2
DKC1O60832 CSNK1G2-204ENST00000589350 780 ntTSL 519.22■□□□□ 0.671e-5■■□□□ 13.2
DKC1O60832 CSNK1G2-209ENST00000591752 648 ntTSL 519.09■□□□□ 0.651e-5■■□□□ 13.2
DKC1O60832 ABCA13-201ENST00000411975 4480 ntTSL 213.29□□□□□ -0.281e-5■■□□□ 13.2
DKC1O60832 ABCA13-205ENST00000453246 4275 ntTSL 210.64□□□□□ -0.711e-5■■□□□ 13.2
DKC1O60832 ABCA13-207ENST00000544596 7870 ntAPPRIS ALT2 TSL 1 (best)9.01□□□□□ -0.971e-5■■□□□ 13.2
DKC1O60832 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.531e-5■■□□□ 13.2
DKC1O60832 SNHG1-207ENST00000537965 578 ntTSL 55.96□□□□□ -1.462e-36■■□□□ 13.2
DKC1O60832 SNHG1-222ENST00000545308 646 ntTSL 24.32□□□□□ -1.722e-36■■□□□ 13.2
DKC1O60832 SNHG1-203ENST00000537024 532 ntTSL 53.99□□□□□ -1.772e-36■■□□□ 13.2
DKC1O60832 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.25□□□□□ -1.892e-36■■□□□ 13.2
DKC1O60832 SNORD28-201ENST00000384706 75 ntBASIC0.03□□□□□ -2.42e-36■■□□□ 13.2
DKC1O60832 TLK1-203ENST00000409443 2783 ntTSL 217.05■□□□□ 0.321e-7■■□□□ 13.1
DKC1O60832 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC15.4■□□□□ 0.061e-7■■□□□ 13.1
DKC1O60832 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.081e-7■■□□□ 13.1
DKC1O60832 TLK1-201ENST00000359766 4321 ntTSL 512.1□□□□□ -0.471e-7■■□□□ 13.1
DKC1O60832 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.25□□□□□ -1.571e-7■■□□□ 13.1
DKC1O60832 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.57□□□□□ -21e-7■■□□□ 13.1
DKC1O60832 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.472e-34■■□□□ 13.1
DKC1O60832 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.84□□□□□ -1.472e-34■■□□□ 13.1
DKC1O60832 CKAP5-212ENST00000533413 3084 ntTSL 1 (best)5.65□□□□□ -1.512e-34■■□□□ 13.1
DKC1O60832 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.26□□□□□ -1.732e-34■■□□□ 13.1
DKC1O60832 SNORD67-201ENST00000390833 111 ntBASIC3.4□□□□□ -1.872e-34■■□□□ 13.1
DKC1O60832 C9orf3-209ENST00000460573 443 ntTSL 525.25■■□□□ 1.633e-6■■□□□ 13.1
DKC1O60832 C9orf3-217ENST00000479161 942 ntTSL 517.44■□□□□ 0.383e-6■■□□□ 13.1
DKC1O60832 C9orf3-206ENST00000428313 2288 ntTSL 1 (best)16.89■□□□□ 0.293e-6■■□□□ 13.1
DKC1O60832 C9orf3-204ENST00000424143 1605 ntTSL 216.12■□□□□ 0.173e-6■■□□□ 13.1
DKC1O60832 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.71■□□□□ 0.13e-6■■□□□ 13.1
DKC1O60832 C9orf3-210ENST00000462125 961 ntTSL 314.84□□□□□ -0.033e-6■■□□□ 13.1
DKC1O60832 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.383e-6■■□□□ 13.1
DKC1O60832 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC13.71□□□□□ -0.222e-6■■□□□ 13.1
DKC1O60832 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.292e-6■■□□□ 13.1
DKC1O60832 ARHGAP12-202ENST00000344936 4128 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.552e-6■■□□□ 13.1
DKC1O60832 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.76□□□□□ -1.172e-6■■□□□ 13.1
DKC1O60832 SNX5-206ENST00000469704 696 ntTSL 329.96■■■□□ 2.391e-323■■□□□ 13.1
DKC1O60832 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.721e-323■■□□□ 13.1
DKC1O60832 SNX5-204ENST00000431277 840 ntTSL 517.92■□□□□ 0.461e-323■■□□□ 13.1
DKC1O60832 SNX5-214ENST00000490175 2025 ntTSL 1 (best)17.58■□□□□ 0.41e-323■■□□□ 13.1
DKC1O60832 SNX5-203ENST00000419004 778 ntTSL 516.72■□□□□ 0.271e-323■■□□□ 13.1
DKC1O60832 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.261e-323■■□□□ 13.1
DKC1O60832 OVOL2-204ENST00000486776 550 ntTSL 316.13■□□□□ 0.171e-323■■□□□ 13.1
DKC1O60832 SNX5-207ENST00000474883 695 ntTSL 54□□□□□ -1.771e-323■■□□□ 13.1
DKC1O60832 SNORD17-201ENST00000390930 237 ntBASIC3.87□□□□□ -1.791e-323■■□□□ 13.1
DKC1O60832 PWAR5-201ENST00000624480 3180 ntBASIC9.18□□□□□ -0.943e-7■■□□□ 13
DKC1O60832 SLC12A4-208ENST00000572010 1016 ntTSL 1 (best)23.82■■□□□ 1.41e-8■■□□□ 13
DKC1O60832 SLC12A4-217ENST00000576462 673 ntTSL 222.2■■□□□ 1.141e-8■■□□□ 13
DKC1O60832 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.62■□□□□ 0.891e-8■■□□□ 13
DKC1O60832 SLC12A4-212ENST00000573023 3649 ntTSL 520.18■□□□□ 0.821e-8■■□□□ 13
DKC1O60832 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.721e-8■■□□□ 13
DKC1O60832 SLC12A4-207ENST00000571299 891 ntTSL 317.44■□□□□ 0.381e-8■■□□□ 13
DKC1O60832 SLC12A4-216ENST00000576377 868 ntTSL 515.7■□□□□ 0.11e-8■■□□□ 13
DKC1O60832 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC12.6□□□□□ -0.391e-8■■□□□ 13
DKC1O60832 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC12.1□□□□□ -0.471e-8■■□□□ 13
DKC1O60832 SLC12A4-206ENST00000570802 3761 ntTSL 211.5□□□□□ -0.571e-8■■□□□ 13
DKC1O60832 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.331e-323■■□□□ 12.9
DKC1O60832 NOP53-207ENST00000598681 1358 ntTSL 525.07■■□□□ 1.61e-323■■□□□ 12.9
DKC1O60832 NOP53-204ENST00000595143 810 ntTSL 522.59■■□□□ 1.211e-323■■□□□ 12.9
DKC1O60832 NOP53-212ENST00000600410 4185 ntTSL 218.05■□□□□ 0.481e-323■■□□□ 12.9
DKC1O60832 NOP53-205ENST00000597985 656 ntTSL 316.83■□□□□ 0.281e-323■■□□□ 12.9
DKC1O60832 NOP53-202ENST00000594182 303 ntTSL 316.66■□□□□ 0.261e-323■■□□□ 12.9
DKC1O60832 SNORD23-201ENST00000408876 110 ntBASIC15.13■□□□□ 0.011e-323■■□□□ 12.9
DKC1O60832 NOP53-208ENST00000598959 501 ntTSL 511.62□□□□□ -0.551e-323■■□□□ 12.9
DKC1O60832 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.083e-10■■□□□ 12.9
DKC1O60832 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.72■□□□□ 0.913e-10■■□□□ 12.9
DKC1O60832 DDRGK1-203ENST00000470203 480 ntTSL 312.72□□□□□ -0.373e-10■■□□□ 12.9
DKC1O60832 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.045e-7■■□□□ 12.9
DKC1O60832 GPR75-ASB3-202ENST00000459916 556 ntTSL 426.71■■□□□ 1.875e-7■■□□□ 12.9
DKC1O60832 GPR75-ASB3-203ENST00000498475 736 ntTSL 526.71■■□□□ 1.875e-7■■□□□ 12.9
DKC1O60832 EXOC3L4-205ENST00000560102 563 ntTSL 324.2■■□□□ 1.463e-42■■□□□ 12.9
DKC1O60832 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.35e-7■■□□□ 12.9
DKC1O60832 ATP1A1-204ENST00000418797 654 ntTSL 322.24■■□□□ 1.155e-9■■□□□ 12.9
DKC1O60832 CTBP1-211ENST00000511907 900 ntTSL 321.68■■□□□ 1.065e-7■■□□□ 12.9
DKC1O60832 CTBP1-205ENST00000504092 920 ntTSL 521.1■□□□□ 0.975e-7■■□□□ 12.9
DKC1O60832 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.08■□□□□ 0.965e-7■■□□□ 12.9
DKC1O60832 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.66■□□□□ 0.95e-7■■□□□ 12.9
DKC1O60832 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.895e-7■■□□□ 12.9
DKC1O60832 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.765e-9■■□□□ 12.9
DKC1O60832 CTBP1-207ENST00000505826 657 ntTSL 519.3■□□□□ 0.685e-7■■□□□ 12.9
DKC1O60832 EXOC3L4-202ENST00000559116 460 ntTSL 519.01■□□□□ 0.633e-42■■□□□ 12.9
DKC1O60832 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.42■□□□□ 0.545e-7■■□□□ 12.9
DKC1O60832 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.535e-9■■□□□ 12.9
DKC1O60832 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.525e-7■■□□□ 12.9
DKC1O60832 CTBP1-210ENST00000510739 774 ntTSL 317.84■□□□□ 0.455e-7■■□□□ 12.9
Retrieved 100 of 8,567 protein–RNA pairs in 144.6 ms