Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm26265-202ENSMUST00000196326 133 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Mir3961-201ENSMUST00000198795 59 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm43578-201ENSMUST00000201250 459 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm45365-201ENSMUST00000209489 256 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm23404-201ENSMUST00000082543 97 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Mir496a-201ENSMUST00000093627 79 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm11859-201ENSMUST00000118099 455 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm22082-201ENSMUST00000157587 161 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm25333-201ENSMUST00000158035 246 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm24390-201ENSMUST00000179578 62 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm24406-201ENSMUST00000083026 128 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm24977-201ENSMUST00000083106 163 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm22972-201ENSMUST00000083297 131 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm25578-201ENSMUST00000083406 104 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.55□□□□□ -2.16
Trim3Q9R1R2 Gm22761-201ENSMUST00000102278 96 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm23015-201ENSMUST00000104145 128 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm25421-201ENSMUST00000104218 164 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm12417-201ENSMUST00000119153 403 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm22221-201ENSMUST00000157362 103 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm22263-201ENSMUST00000180060 104 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm27845-201ENSMUST00000184479 114 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm29167-201ENSMUST00000190024 377 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm33866-201ENSMUST00000196911 289 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.54□□□□□ -2.16
Trim3Q9R1R2 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm22315-201ENSMUST00000158010 143 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm22768-201ENSMUST00000158366 153 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm20477-201ENSMUST00000174028 280 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm26400-201ENSMUST00000175012 85 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm24799-201ENSMUST00000178431 79 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Mir8090-201ENSMUST00000185078 136 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Gm44654-201ENSMUST00000208052 329 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 Mir429-201ENSMUST00000083493 83 ntBASIC1.53□□□□□ -2.16
Trim3Q9R1R2 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.53□□□□□ -2.17
Trim3Q9R1R2 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Gm13518-201ENSMUST00000120018 233 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Gm24618-201ENSMUST00000177718 94 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Gm23953-201ENSMUST00000178214 94 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Gm26332-201ENSMUST00000179813 94 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Gm22863-201ENSMUST00000180265 94 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Gm27248-201ENSMUST00000184004 166 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Gm23100-201ENSMUST00000083455 141 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Mir148b-201ENSMUST00000083626 97 ntBASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trim3Q9R1R2 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Mir223-201ENSMUST00000102112 110 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm25377-201ENSMUST00000104334 129 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm11862-201ENSMUST00000119678 659 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm14782-201ENSMUST00000120151 195 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm22447-201ENSMUST00000158155 92 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Mir1936-201ENSMUST00000158699 93 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm22665-201ENSMUST00000158720 275 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm26159-201ENSMUST00000158968 104 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm25730-201ENSMUST00000178753 165 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm26435-201ENSMUST00000179026 107 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm23793-201ENSMUST00000179396 117 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm25936-201ENSMUST00000179952 114 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm29603-201ENSMUST00000186792 334 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm28717-201ENSMUST00000189950 315 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.51□□□□□ -2.17
Trim3Q9R1R2 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.51□□□□□ -2.17
Trim3Q9R1R2 Gm6025-201ENSMUST00000121517 201 ntBASIC1.5□□□□□ -2.17
Trim3Q9R1R2 Gm25805-201ENSMUST00000122788 108 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms