Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm29469-201ENSMUST00000191448 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28408-201ENSMUST00000191557 463 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm37713-201ENSMUST00000191746 198 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm43250-201ENSMUST00000196536 273 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.04□□□□□ -2.08
Trim60Q8VI40 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trim60Q8VI40 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm26249-201ENSMUST00000116708 118 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm12941-201ENSMUST00000117934 220 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm24630-201ENSMUST00000122768 106 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm25805-201ENSMUST00000122788 108 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm25113-201ENSMUST00000157185 143 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm26345-201ENSMUST00000157534 120 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm22114-201ENSMUST00000177756 107 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm25450-201ENSMUST00000179144 107 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm25253-201ENSMUST00000179958 107 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm28579-201ENSMUST00000186143 369 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.03□□□□□ -2.08
Trim60Q8VI40 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm44482-201ENSMUST00000199232 103 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Mir322-201ENSMUST00000083484 95 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Gm26175-201ENSMUST00000083794 131 ntBASIC2.03□□□□□ -2.08
Trim60Q8VI40 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim60Q8VI40 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trim60Q8VI40 Gm23951-201ENSMUST00000104029 132 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Gm15526-201ENSMUST00000112504 204 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Gm15692-201ENSMUST00000152173 352 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Gm23469-201ENSMUST00000157131 104 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Gm45296-201ENSMUST00000209625 205 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Gm25793-201ENSMUST00000083287 107 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Mir107-201ENSMUST00000083660 87 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Mir151-201ENSMUST00000083678 68 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Gm23345-201ENSMUST00000083817 150 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Snora33-201ENSMUST00000093556 129 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim60Q8VI40 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.02□□□□□ -2.09
Trim60Q8VI40 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trim60Q8VI40 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Trim60Q8VI40 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trim60Q8VI40 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trim60Q8VI40 Gm26077-201ENSMUST00000104064 123 ntBASIC2.01□□□□□ -2.09
Trim60Q8VI40 Gm14761-201ENSMUST00000121363 262 ntBASIC2.01□□□□□ -2.09
Trim60Q8VI40 Gm22216-201ENSMUST00000157557 114 ntBASIC2.01□□□□□ -2.09
Trim60Q8VI40 Gm44473-201ENSMUST00000204039 152 ntBASIC2.01□□□□□ -2.09
Trim60Q8VI40 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.01□□□□□ -2.09
Trim60Q8VI40 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.01□□□□□ -2.09
Trim60Q8VI40 Gm44114-201ENSMUST00000203270 2727 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm22193-201ENSMUST00000116868 76 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm13992-201ENSMUST00000120558 156 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm22479-201ENSMUST00000122566 81 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trim60Q8VI40 Gm23232-201ENSMUST00000157300 105 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm24783-201ENSMUST00000157639 100 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm23759-201ENSMUST00000158351 268 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm23858-201ENSMUST00000158384 106 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm23548-201ENSMUST00000158963 106 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm25994-201ENSMUST00000175392 101 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm23355-201ENSMUST00000177614 107 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm17067-202ENSMUST00000180131 123 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm23148-201ENSMUST00000180367 107 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Mir6379-201ENSMUST00000183392 115 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm19901-201ENSMUST00000192191 495 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm36946-201ENSMUST00000192706 435 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm26265-202ENSMUST00000196326 133 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trim60Q8VI40 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm23625-201ENSMUST00000082457 100 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm25258-201ENSMUST00000083049 107 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm24412-201ENSMUST00000083426 109 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm43484-201ENSMUST00000198333 5966 ntBASIC2□□□□□ -2.09
Trim60Q8VI40 Gm23011-201ENSMUST00000104148 132 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm12417-201ENSMUST00000119153 403 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm14782-201ENSMUST00000120151 195 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm11786-201ENSMUST00000120799 155 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm23983-201ENSMUST00000157142 114 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Mir1949-201ENSMUST00000157434 141 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm22814-201ENSMUST00000157452 104 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm24501-201ENSMUST00000158452 62 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm23474-201ENSMUST00000158884 75 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm17161-201ENSMUST00000169187 524 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm5900-201ENSMUST00000179862 375 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Mir6406-201ENSMUST00000183592 120 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Mir6997-201ENSMUST00000184313 71 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm27979-201ENSMUST00000185126 56 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm29147-201ENSMUST00000186846 315 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm29227-201ENSMUST00000187139 315 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm29034-201ENSMUST00000188099 315 ntBASIC1.99□□□□□ -2.09
Trim60Q8VI40 Gm28160-201ENSMUST00000191229 315 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 153.8 ms