Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Vcpip1Q8CDG3 Gm23803-201ENSMUST00000104610 132 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm14838-201ENSMUST00000118913 248 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm15497-201ENSMUST00000119137 551 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm15536-201ENSMUST00000121411 114 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm12443-201ENSMUST00000122308 323 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm22321-201ENSMUST00000157152 104 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm23642-201ENSMUST00000157858 258 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm28453-203ENSMUST00000187041 189 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm28848-201ENSMUST00000189984 168 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm37923-201ENSMUST00000191624 161 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm43193-201ENSMUST00000197732 441 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Vcpip1Q8CDG3 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm23678-201ENSMUST00000083157 107 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm23461-201ENSMUST00000083265 107 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm22973-201ENSMUST00000083298 191 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm22294-201ENSMUST00000083308 104 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.55□□□□□ -2
Vcpip1Q8CDG3 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm23951-201ENSMUST00000104029 132 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm22784-201ENSMUST00000104088 132 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm12513-201ENSMUST00000118617 352 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm12934-201ENSMUST00000119221 343 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm22027-201ENSMUST00000122737 127 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm24771-201ENSMUST00000158508 137 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm24813-201ENSMUST00000175310 84 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm28825-201ENSMUST00000186233 238 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm44533-201ENSMUST00000207782 268 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.54□□□□□ -2
Vcpip1Q8CDG3 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Snord47-201ENSMUST00000083034 77 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm23453-201ENSMUST00000083326 106 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Vcpip1Q8CDG3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Vcpip1Q8CDG3 Mir872-201ENSMUST00000104728 81 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm13756-201ENSMUST00000117618 222 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm14652-201ENSMUST00000118479 235 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm14782-201ENSMUST00000120151 195 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm23331-201ENSMUST00000157423 108 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm24750-201ENSMUST00000157843 104 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm23640-201ENSMUST00000157860 104 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm24601-201ENSMUST00000157970 143 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm24726-201ENSMUST00000158232 121 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Mir376a-201ENSMUST00000197584 68 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.53□□□□□ -2
Vcpip1Q8CDG3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm24116-201ENSMUST00000103975 107 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm6954-201ENSMUST00000117416 225 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm13992-201ENSMUST00000120558 156 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm2830-201ENSMUST00000140330 385 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm26280-201ENSMUST00000157096 101 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm25428-201ENSMUST00000157608 114 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm23219-201ENSMUST00000158123 87 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm22382-201ENSMUST00000158185 130 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm2962-201ENSMUST00000159266 336 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm22264-201ENSMUST00000178200 107 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm22450-201ENSMUST00000179641 107 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm25024-201ENSMUST00000179667 104 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm25473-201ENSMUST00000180191 107 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm27369-201ENSMUST00000185182 71 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm37037-201ENSMUST00000194475 424 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm42739-201ENSMUST00000200687 226 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm24313-201ENSMUST00000082561 133 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm24856-201ENSMUST00000082809 107 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm23377-201ENSMUST00000082943 126 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm26071-201ENSMUST00000083261 107 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm24521-201ENSMUST00000083958 107 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.52□□□□□ -2.01
Vcpip1Q8CDG3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Vcpip1Q8CDG3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 360.4 ms