Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm23651-201ENSMUST00000116755 120 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm22477-201ENSMUST00000122569 316 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm23922-201ENSMUST00000178792 79 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm24657-201ENSMUST00000180085 79 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm22996-201ENSMUST00000180236 79 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm28409-201ENSMUST00000187064 103 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Mir488-201ENSMUST00000093595 109 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.34□□□□□ -1.88
Ubp1Q811S7 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm12025-201ENSMUST00000117768 144 ntBASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm24936-201ENSMUST00000122598 247 ntBASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm22967-201ENSMUST00000157956 239 ntBASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm22384-201ENSMUST00000158187 104 ntBASIC3.33□□□□□ -1.88
Ubp1Q811S7 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm37097-201ENSMUST00000193676 336 ntBASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm44338-201ENSMUST00000198614 110 ntBASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm10351-201ENSMUST00000087694 125 ntBASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gm10161-201ENSMUST00000091506 204 ntBASIC3.33□□□□□ -1.88
Ubp1Q811S7 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ubp1Q811S7 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ubp1Q811S7 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm23320-201ENSMUST00000104462 127 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm14687-201ENSMUST00000120206 363 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm14564-201ENSMUST00000122159 294 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm26105-201ENSMUST00000157253 190 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm23326-201ENSMUST00000157419 105 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm23671-201ENSMUST00000157472 103 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm22850-201ENSMUST00000157714 82 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm24553-201ENSMUST00000158653 131 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm24304-201ENSMUST00000177635 107 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Mir6408-201ENSMUST00000183643 91 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Mir21b-201ENSMUST00000184317 108 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm28647-201ENSMUST00000188416 197 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Gm28159-201ENSMUST00000190296 696 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Snord35b-201ENSMUST00000082833 87 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Mir29c-201ENSMUST00000083614 88 ntBASIC3.32□□□□□ -1.88
Ubp1Q811S7 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ubp1Q811S7 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ubp1Q811S7 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ubp1Q811S7 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm14536-201ENSMUST00000118324 138 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm15027-201ENSMUST00000120922 138 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm22380-201ENSMUST00000157479 95 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm37377-201ENSMUST00000191733 304 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm18546-201ENSMUST00000197245 676 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm42988-201ENSMUST00000198116 225 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm24533-201ENSMUST00000083138 196 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Gm23138-201ENSMUST00000083365 103 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.31□□□□□ -1.88
Ubp1Q811S7 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ubp1Q811S7 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Ubp1Q811S7 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ubp1Q811S7 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ubp1Q811S7 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ubp1Q811S7 Gm25879-201ENSMUST00000104330 107 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Mir878-201ENSMUST00000104680 78 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Gm25572-201ENSMUST00000157527 172 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Gm25748-201ENSMUST00000175487 70 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Gm29308-201ENSMUST00000188863 315 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Gm28537-201ENSMUST00000189026 315 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Gm29631-201ENSMUST00000191065 315 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Gm37116-201ENSMUST00000195161 147 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Gm42807-201ENSMUST00000200141 329 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.3□□□□□ -1.88
Ubp1Q811S7 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Ubp1Q811S7 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Ubp1Q811S7 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ubp1Q811S7 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm24605-201ENSMUST00000104772 96 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm24586-201ENSMUST00000116695 89 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm12858-201ENSMUST00000121913 208 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm22535-201ENSMUST00000158174 119 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm22510-201ENSMUST00000179304 79 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm26336-201ENSMUST00000179449 79 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm26390-201ENSMUST00000179628 79 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm28169-201ENSMUST00000190342 345 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm38364-201ENSMUST00000191814 179 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm42623-201ENSMUST00000197225 379 ntBASIC3.29□□□□□ -1.88
Ubp1Q811S7 Gm32381-201ENSMUST00000203192 476 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms