Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm28848-201ENSMUST00000189984 168 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm36946-201ENSMUST00000192706 435 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm44024-201ENSMUST00000203008 476 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm43865-201ENSMUST00000204721 127 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Mir320-201ENSMUST00000083594 82 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Mir301-201ENSMUST00000083655 86 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm24907-201ENSMUST00000116932 128 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm14803-201ENSMUST00000117163 361 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm13672-201ENSMUST00000117554 459 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm15365-201ENSMUST00000122392 300 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm24629-201ENSMUST00000122762 89 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm14298-201ENSMUST00000139032 237 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm16356-201ENSMUST00000143300 169 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm22113-201ENSMUST00000158343 104 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm22527-201ENSMUST00000158816 106 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm22448-201ENSMUST00000179254 107 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm28995-201ENSMUST00000186625 261 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm37162-201ENSMUST00000191708 551 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm44010-201ENSMUST00000204432 331 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm45654-201ENSMUST00000210980 123 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm9318-201ENSMUST00000222444 438 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm26265-201ENSMUST00000083277 135 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.93□□□□□ -2.1
Trim58Q5NCC9 Mir872-201ENSMUST00000104728 81 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm22678-201ENSMUST00000116974 101 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm11572-201ENSMUST00000119164 120 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm11606-201ENSMUST00000120706 617 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm22216-201ENSMUST00000157557 114 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm24573-201ENSMUST00000175499 112 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm29005-201ENSMUST00000186773 320 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm29490-201ENSMUST00000190923 342 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm44473-201ENSMUST00000204039 152 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm18991-201ENSMUST00000209225 746 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm2829-201ENSMUST00000213121 499 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm23406-201ENSMUST00000082537 122 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm23462-201ENSMUST00000083264 104 ntBASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.92□□□□□ -2.1
Trim58Q5NCC9 Gm11794-201ENSMUST00000119446 237 ntBASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Gm23232-201ENSMUST00000157300 105 ntBASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Gm23589-201ENSMUST00000157660 105 ntBASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Gm36891-201ENSMUST00000191995 655 ntBASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Gm44794-201ENSMUST00000206550 411 ntBASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.91□□□□□ -2.1
Trim58Q5NCC9 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.91□□□□□ -2.1
Trim58Q5NCC9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Mir340-201ENSMUST00000083483 98 ntBASIC1.91□□□□□ -2.1
Trim58Q5NCC9 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.91□□□□□ -2.1
Trim58Q5NCC9 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.9□□□□□ -2.1
Trim58Q5NCC9 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
Trim58Q5NCC9 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.9□□□□□ -2.1
Trim58Q5NCC9 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm5396-201ENSMUST00000121222 532 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm25392-201ENSMUST00000157335 297 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm25658-201ENSMUST00000158472 128 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm23355-201ENSMUST00000177614 107 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm23148-201ENSMUST00000180367 107 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm37579-201ENSMUST00000194291 142 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm6109-201ENSMUST00000223297 348 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm22062-201ENSMUST00000082563 107 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm25258-201ENSMUST00000083049 107 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Mir32-201ENSMUST00000083610 70 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm22723-201ENSMUST00000083820 129 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm23851-201ENSMUST00000083831 103 ntBASIC1.9□□□□□ -2.11
Trim58Q5NCC9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim58Q5NCC9 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm15002-201ENSMUST00000118406 452 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm14001-201ENSMUST00000118847 247 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm14215-201ENSMUST00000120578 221 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm24177-201ENSMUST00000158927 131 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm29147-201ENSMUST00000186846 315 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm29227-201ENSMUST00000187139 315 ntBASIC1.89□□□□□ -2.11
Trim58Q5NCC9 Gm29034-201ENSMUST00000188099 315 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 181.6 ms